RNA–Protein interactions for RNA: YFR010W

UBP6, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP6, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP6YFR010W CPR1P14832 162 aaKnown RBP3.3□□□□□ -1.88
UBP6YFR010W BGL2P15703 313 aaKnown RBP3.3□□□□□ -1.88
UBP6YFR010W RPB3P16370 318 aaKnown RBP3.3□□□□□ -1.88
UBP6YFR010W PHO89P38361 574 aa3.3□□□□□ -1.88
UBP6YFR010W GAA1P39012 614 aa3.3□□□□□ -1.88
UBP6YFR010W EAF6P47128 113 aa3.3□□□□□ -1.88
UBP6YFR010W EMI1Q04406 187 aa3.3□□□□□ -1.88
UBP6YFR010W YAL063C-AQ3E791 96 aa3.3□□□□□ -1.88
UBP6YFR010W PDR11P40550 1411 aa3.3□□□□□ -1.88
UBP6YFR010W YPR170W-BP0C5R9 85 aa3.29□□□□□ -1.88
UBP6YFR010W YER190C-BP0CX94 160 aa3.29□□□□□ -1.88
UBP6YFR010W YEL077W-AP0CX95 160 aa3.29□□□□□ -1.88
UBP6YFR010W YGR296C-BP0CX96 160 aa3.29□□□□□ -1.88
UBP6YFR010W YPL283W-BP0CX97 160 aa3.29□□□□□ -1.88
UBP6YFR010W YPR204C-AP0CX98 160 aa3.29□□□□□ -1.88
UBP6YFR010W HSP12P22943 109 aaKnown RBP3.29□□□□□ -1.88
UBP6YFR010W MRS4P23500 304 aa3.29□□□□□ -1.88
UBP6YFR010W TOM40P23644 387 aaKnown RBP3.29□□□□□ -1.88
UBP6YFR010W YAR029WP39549 74 aa3.29□□□□□ -1.88
UBP6YFR010W YER188WP40103 239 aa3.29□□□□□ -1.88
UBP6YFR010W MPM1P40364 252 aa3.29□□□□□ -1.88
UBP6YFR010W PHS1P40857 217 aa3.29□□□□□ -1.88
UBP6YFR010W YFL019CP43576 117 aa3.29□□□□□ -1.88
UBP6YFR010W BAT2P47176 376 aaKnown RBP3.29□□□□□ -1.88
UBP6YFR010W YCL001W-AP87012 153 aa3.29□□□□□ -1.88
UBP6YFR010W YDR415CQ04033 374 aaPredicted RBP3.29□□□□□ -1.88
UBP6YFR010W YOR020W-AQ3E824 90 aa3.29□□□□□ -1.88
UBP6YFR010W SPC25P40014 221 aa3.29□□□□□ -1.88
UBP6YFR010W GAT4P40569 121 aa3.29□□□□□ -1.88
UBP6YFR010W YGL262WP53054 175 aa3.29□□□□□ -1.88
UBP6YFR010W EMC4P53073 190 aa3.29□□□□□ -1.88
UBP6YFR010W OSH6Q02201 448 aa3.29□□□□□ -1.88
UBP6YFR010W EST3Q03096 181 aa3.29□□□□□ -1.88
UBP6YFR010W YMR252CQ04814 134 aa3.29□□□□□ -1.88
UBP6YFR010W FCF1Q05498 189 aaPredicted RBP3.29□□□□□ -1.88
UBP6YFR010W YOL014WQ08110 124 aa3.29□□□□□ -1.88
UBP6YFR010W ATX2Q12067 313 aa3.29□□□□□ -1.88
UBP6YFR010W YML100W-AQ8TGT0 57 aa3.29□□□□□ -1.88
UBP6YFR010W DDP1Q99321 188 aaKnown RBP3.29□□□□□ -1.88
UBP6YFR010W LTE1P07866 1435 aa3.28□□□□□ -1.88
UBP6YFR010W ESC1Q03661 1658 aaKnown RBP3.28□□□□□ -1.88
UBP6YFR010W YEL009C-AA0A023PZF2 135 aa3.28□□□□□ -1.88
UBP6YFR010W SGA1P08019 549 aa3.28□□□□□ -1.88
UBP6YFR010W COX10P21592 462 aa3.28□□□□□ -1.88
UBP6YFR010W BET1P22804 142 aa3.28□□□□□ -1.88
UBP6YFR010W ARO2P28777 376 aaKnown RBP3.28□□□□□ -1.88
UBP6YFR010W SFT2P38166 215 aa3.28□□□□□ -1.88
UBP6YFR010W SHE1P38200 338 aa3.28□□□□□ -1.88
UBP6YFR010W OM14P38325 134 aa3.28□□□□□ -1.88
UBP6YFR010W FYV4P38783 130 aaPredicted RBP3.28□□□□□ -1.88
UBP6YFR010W HTD2P38790 280 aaKnown RBP3.28□□□□□ -1.88
UBP6YFR010W TEM1P38987 245 aa3.28□□□□□ -1.88
UBP6YFR010W AVT6P40074 448 aa3.28□□□□□ -1.88
UBP6YFR010W PFS2P42841 465 aaKnown RBP3.28□□□□□ -1.88
UBP6YFR010W YJL028WP47062 111 aa3.28□□□□□ -1.88
UBP6YFR010W DOC1P53068 250 aa3.28□□□□□ -1.88
UBP6YFR010W CLD1P53264 445 aa3.28□□□□□ -1.88
UBP6YFR010W SAY1P53324 424 aa3.28□□□□□ -1.88
UBP6YFR010W YMR103CQ04436 120 aa3.28□□□□□ -1.88
UBP6YFR010W COA4Q05809 96 aa3.28□□□□□ -1.88
UBP6YFR010W ISD11Q6Q560 94 aa3.28□□□□□ -1.88
UBP6YFR010W TRP1P00912 224 aa3.27□□□□□ -1.89
UBP6YFR010W SCM4P32564 187 aa3.27□□□□□ -1.89
UBP6YFR010W MSA2P36157 363 aa3.27□□□□□ -1.89
UBP6YFR010W YIL059CP40520 121 aa3.27□□□□□ -1.89
UBP6YFR010W SYS1P41544 203 aa3.27□□□□□ -1.89
UBP6YFR010W PAM16P42949 149 aa3.27□□□□□ -1.89
UBP6YFR010W RCE1Q03530 315 aa3.27□□□□□ -1.89
UBP6YFR010W KEI1Q06346 221 aa3.27□□□□□ -1.89
UBP6YFR010W RAD28Q12021 506 aa3.27□□□□□ -1.89
UBP6YFR010W YOR097CQ12274 175 aaPredicted RBP3.27□□□□□ -1.89
UBP6YFR010W YLR156WP0CE96 114 aa3.26□□□□□ -1.89
UBP6YFR010W YLR159WP0CE97 114 aa3.26□□□□□ -1.89
UBP6YFR010W YLR161WP0CE98 114 aa3.26□□□□□ -1.89
UBP6YFR010W YFL068WP0CX99 160 aa3.26□□□□□ -1.89
UBP6YFR010W YLL066W-AP0CY00 160 aa3.26□□□□□ -1.89
UBP6YFR010W YLL067W-AP0CY01 160 aa3.26□□□□□ -1.89
UBP6YFR010W URA5P13298 226 aaKnown RBP3.26□□□□□ -1.89
UBP6YFR010W CUP9P41817 306 aa3.26□□□□□ -1.89
UBP6YFR010W YJR085CP47131 105 aaKnown RBP3.26□□□□□ -1.89
UBP6YFR010W PGU1P47180 361 aa3.26□□□□□ -1.89
UBP6YFR010W SPG3Q04398 127 aaPredicted RBP3.26□□□□□ -1.89
UBP6YFR010W SLD7Q08457 257 aa3.26□□□□□ -1.89
UBP6YFR010W CRC1Q12289 327 aa3.26□□□□□ -1.89
UBP6YFR010W ATO3Q12359 275 aa3.26□□□□□ -1.89
UBP6YFR010W GEA2P39993 1459 aaKnown RBP3.26□□□□□ -1.89
UBP6YFR010W RAD10P06838 210 aa3.25□□□□□ -1.89
UBP6YFR010W ATR1P13090 542 aa3.25□□□□□ -1.89
UBP6YFR010W HAP3P13434 144 aa3.25□□□□□ -1.89
UBP6YFR010W ATP15P21306 62 aa3.25□□□□□ -1.89
UBP6YFR010W VMA11P32842 164 aa3.25□□□□□ -1.89
UBP6YFR010W FLO5P38894 1075 aa3.25□□□□□ -1.89
UBP6YFR010W VTC1P40046 129 aaRIP-Chip data3.25□□□□□ -1.89not detected
UBP6YFR010W YNL208WP40159 199 aaKnown RBP3.25□□□□□ -1.89
UBP6YFR010W DIM1P41819 318 aaKnown RBP3.25□□□□□ -1.89
UBP6YFR010W YFR045WP43617 309 aa3.25□□□□□ -1.89
UBP6YFR010W NCA3P46955 337 aa3.25□□□□□ -1.89
UBP6YFR010W YGR164WP53291 111 aa3.25□□□□□ -1.89
UBP6YFR010W YPL039WQ03080 316 aa3.25□□□□□ -1.89
UBP6YFR010W YMR254CQ04838 102 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms