RNA–Protein interactions for RNA: YER144C

UBP5, Transcript of Putative ubiquitin-specific protease, yeast

Gene UBP5, Length 2,418 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP5	YER144C	SPS2	P08459	502 aa		2.76	□□□□□ -1.97
UBP5	YER144C	YCR023C	P25351	611 aa		2.76	□□□□□ -1.97
UBP5	YER144C	PPA2	P28239	310 aa		2.76	□□□□□ -1.97
UBP5	YER144C	ARO2	P28777	376 aa	Known RBP	2.76	□□□□□ -1.97
UBP5	YER144C	YBR063C	P38083	404 aa		2.76	□□□□□ -1.97
UBP5	YER144C	LSM2	P38203	95 aa	Known RBP	2.76	□□□□□ -1.97
UBP5	YER144C	SRP14	P38985	146 aa		2.76	□□□□□ -1.97
UBP5	YER144C	YJL218W	P40892	196 aa	Known RBP	2.76	□□□□□ -1.97
UBP5	YER144C	GLR1	P41921	483 aa	Known RBP	2.76	□□□□□ -1.97
UBP5	YER144C	UBC13	P52490	153 aa		2.76	□□□□□ -1.97
UBP5	YER144C	MGA1	P53050	456 aa		2.76	□□□□□ -1.97
UBP5	YER144C	ARO8	P53090	500 aa	Known RBP	2.76	□□□□□ -1.97
UBP5	YER144C	MST27	P53176	234 aa		2.76	□□□□□ -1.97
UBP5	YER144C	BOR1	P53838	576 aa		2.76	□□□□□ -1.97
UBP5	YER144C	MIX14	Q04341	121 aa		2.76	□□□□□ -1.97
UBP5	YER144C	HRT1	Q08273	121 aa		2.76	□□□□□ -1.97
UBP5	YER144C	POM33	Q12164	279 aa		2.76	□□□□□ -1.97
UBP5	YER144C	YIR021W-A	Q3E739	70 aa		2.76	□□□□□ -1.97
UBP5	YER144C	YCR024C-B	Q3E7Z8	88 aa		2.76	□□□□□ -1.97
UBP5	YER144C	YPL229W	Q99395	206 aa		2.76	□□□□□ -1.97
UBP5	YER144C	HFA1	P32874	2273 aa		2.75	□□□□□ -1.97
UBP5	YER144C	YAL064W-B	O13512	126 aa		2.75	□□□□□ -1.97
UBP5	YER144C	PHO2	P07269	559 aa		2.75	□□□□□ -1.97
UBP5	YER144C	CPR1	P14832	162 aa	Known RBP	2.75	□□□□□ -1.97
UBP5	YER144C	CDC43	P18898	376 aa		2.75	□□□□□ -1.97
UBP5	YER144C	AVT5	P38176	459 aa		2.75	□□□□□ -1.97
UBP5	YER144C	MBA1	P38300	278 aa		2.75	□□□□□ -1.97
UBP5	YER144C	SNU13	P39990	126 aa	Known RBP	2.75	□□□□□ -1.97
UBP5	YER144C	MRH4	P53166	561 aa		2.75	□□□□□ -1.97
UBP5	YER144C	POP6	P53218	158 aa		2.75	□□□□□ -1.97
UBP5	YER144C	VHT1	P53241	593 aa		2.75	□□□□□ -1.97
UBP5	YER144C	MAK3	Q03503	176 aa		2.75	□□□□□ -1.97
UBP5	YER144C	TDA1	Q03533	586 aa		2.75	□□□□□ -1.97
UBP5	YER144C	SDH7	Q04401	133 aa		2.75	□□□□□ -1.97
UBP5	YER144C	PRP11	Q07350	266 aa	Predicted RBP	2.75	□□□□□ -1.97
UBP5	YER144C	MIM1	Q08176	113 aa		2.75	□□□□□ -1.97
UBP5	YER144C	AYT1	Q12226	474 aa		2.75	□□□□□ -1.97
UBP5	YER144C	YLR099W-A	Q3E798	87 aa		2.75	□□□□□ -1.97
UBP5	YER144C	YCR075W-A	Q3E830	75 aa		2.75	□□□□□ -1.97
UBP5	YER144C	VAR1	P02381	398 aa		2.74	□□□□□ -1.97
UBP5	YER144C	MSW1	P04803	379 aa		2.74	□□□□□ -1.97
UBP5	YER144C	PCL1	P24867	279 aa		2.74	□□□□□ -1.97
UBP5	YER144C	PUT3	P25502	979 aa	Predicted RBP	2.74	□□□□□ -1.97
UBP5	YER144C	PDC2	P32896	925 aa		2.74	□□□□□ -1.97
UBP5	YER144C	PTI1	P39927	425 aa	Predicted RBP	2.74	□□□□□ -1.97
UBP5	YER144C	OST1	P41543	476 aa	Known RBP	2.74	□□□□□ -1.97
UBP5	YER144C	MCM22	P47167	239 aa		2.74	□□□□□ -1.97
UBP5	YER144C	YNL234W	P53857	426 aa		2.74	□□□□□ -1.97
UBP5	YER144C	ELC1	Q03071	99 aa		2.74	□□□□□ -1.97
UBP5	YER144C	ADH6	Q04894	360 aa	Known RBP	2.74	□□□□□ -1.97
UBP5	YER144C	CSI2	Q08054	341 aa		2.74	□□□□□ -1.97
UBP5	YER144C	YDR157W	A0A023PZE8	133 aa		2.74	□□□□□ -1.97
UBP5	YER144C	SIR2	P06700	562 aa		2.74	□□□□□ -1.97
UBP5	YER144C	PUT1	P09368	476 aa		2.74	□□□□□ -1.97
UBP5	YER144C	YBR121C-A	P0C5L4	52 aa		2.74	□□□□□ -1.97
UBP5	YER144C	HAP3	P13434	144 aa		2.74	□□□□□ -1.97
UBP5	YER144C	STE18	P18852	110 aa		2.74	□□□□□ -1.97
UBP5	YER144C	MDH2	P22133	377 aa		2.74	□□□□□ -1.97
UBP5	YER144C	RPL24B	P24000	155 aa	Known RBP	2.74	□□□□□ -1.97
UBP5	YER144C	ATG15	P25641	520 aa		2.74	□□□□□ -1.97
UBP5	YER144C	RFA3	P26755	122 aa	Known RBP	2.74	□□□□□ -1.97
UBP5	YER144C	MRP49	P32388	137 aa		2.74	□□□□□ -1.97
UBP5	YER144C	IES6	P32617	166 aa		2.74	□□□□□ -1.97
UBP5	YER144C	PAU24	P38155	120 aa		2.74	□□□□□ -1.97
UBP5	YER144C	PET8	P38921	284 aa		2.74	□□□□□ -1.97
UBP5	YER144C	YND1	P40009	630 aa		2.74	□□□□□ -1.97
UBP5	YER144C	YJR012C	P47087	207 aa		2.74	□□□□□ -1.97
UBP5	YER144C	MTM1	P53320	366 aa		2.74	□□□□□ -1.97
UBP5	YER144C	CRZ1	P53968	678 aa		2.74	□□□□□ -1.97
UBP5	YER144C	APS2	Q00381	147 aa		2.74	□□□□□ -1.97
UBP5	YER144C	PET191	Q02772	108 aa		2.74	□□□□□ -1.97
UBP5	YER144C	UPS3	Q04006	179 aa		2.74	□□□□□ -1.97
UBP5	YER144C	YEL009C-A	A0A023PZF2	135 aa		2.73	□□□□□ -1.97
UBP5	YER144C	RPL15A	P05748	204 aa	Known RBP	2.73	□□□□□ -1.97
UBP5	YER144C	CUP2	P15315	225 aa		2.73	□□□□□ -1.97
UBP5	YER144C	TRR1	P29509	319 aa	Known RBP	2.73	□□□□□ -1.97
UBP5	YER144C	PAU2	P32612	120 aa		2.73	□□□□□ -1.97
UBP5	YER144C	MRPL39	P36533	70 aa		2.73	□□□□□ -1.97
UBP5	YER144C	DOG2	P38773	246 aa		2.73	□□□□□ -1.97
UBP5	YER144C	IKI1	P38874	309 aa		2.73	□□□□□ -1.97
UBP5	YER144C	ERJ5	P43613	295 aa	Predicted RBP	2.73	□□□□□ -1.97
UBP5	YER144C	DAN1	P47178	298 aa		2.73	□□□□□ -1.97
UBP5	YER144C	UBC7	Q02159	165 aa		2.73	□□□□□ -1.97
UBP5	YER144C	RAD28	Q12021	506 aa		2.73	□□□□□ -1.97
UBP5	YER144C	YHR214C-E	Q8TGK0	99 aa		2.73	□□□□□ -1.97
UBP5	YER144C	CSF1	Q12150	2958 aa		2.73	□□□□□ -1.97
UBP5	YER144C	SEN1	Q00416	2231 aa	Known RBP	2.73	□□□□□ -1.97
UBP5	YER144C	CTA1	P15202	515 aa		2.73	□□□□□ -1.97
UBP5	YER144C	SEC22	P22214	214 aa		2.73	□□□□□ -1.97
UBP5	YER144C	SWD2	P36104	329 aa	Predicted RBP	2.73	□□□□□ -1.97
UBP5	YER144C	MIC12	P38341	106 aa		2.73	□□□□□ -1.97
UBP5	YER144C	BRR6	P53062	197 aa		2.73	□□□□□ -1.97
UBP5	YER144C	TMA23	Q03525	211 aa		2.73	□□□□□ -1.97
UBP5	YER144C	TSA2	Q04120	196 aa		2.73	□□□□□ -1.97
UBP5	YER144C	MRX8	Q05473	314 aa		2.73	□□□□□ -1.97
UBP5	YER144C	YIL134C-A	Q45U18	67 aa		2.73	□□□□□ -1.97
UBP5	YER144C	ATP5	P09457	212 aa		2.72	□□□□□ -1.97
UBP5	YER144C	HOM6	P31116	359 aa	Known RBP	2.72	□□□□□ -1.97
UBP5	YER144C	MRPL11	P36521	249 aa	Predicted RBP	2.72	□□□□□ -1.97
UBP5	YER144C	SDS24	P38314	527 aa		2.72	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms