RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeastyeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC1YDR164C WSC4P38739 605 aa0.65□□□□□ -2.31
SEC1YDR164C CTR2P38865 189 aa0.65□□□□□ -2.31
SEC1YDR164C ASP1P38986 381 aaPredicted RBP0.65□□□□□ -2.31
SEC1YDR164C COX14P39103 70 aa0.65□□□□□ -2.31
SEC1YDR164C YIL163CP40448 117 aa0.65□□□□□ -2.31
SEC1YDR164C PRM5P40476 318 aa0.65□□□□□ -2.31
SEC1YDR164C BMT5P40493 336 aa0.65□□□□□ -2.31
SEC1YDR164C GNA1P43577 159 aaPredicted RBP0.65□□□□□ -2.31
SEC1YDR164C YJR012CP47087 207 aa0.65□□□□□ -2.31
SEC1YDR164C AIM24P47127 394 aa0.65□□□□□ -2.31
SEC1YDR164C YJR085CP47131 105 aaKnown RBP0.65□□□□□ -2.31
SEC1YDR164C ARO8P53090 500 aaKnown RBP0.65□□□□□ -2.31
SEC1YDR164C YGR017WP53210 297 aa0.65□□□□□ -2.31
SEC1YDR164C DYN2Q02647 92 aa0.65□□□□□ -2.31
SEC1YDR164C YPL080CQ02826 108 aa0.65□□□□□ -2.31
SEC1YDR164C CGI121Q03705 181 aaKnown RBP0.65□□□□□ -2.31
SEC1YDR164C YDR249CQ03787 373 aa0.65□□□□□ -2.31
SEC1YDR164C API2Q04413 109 aa0.65□□□□□ -2.31
SEC1YDR164C RIM9Q04734 239 aa0.65□□□□□ -2.31
SEC1YDR164C PBA1Q05778 276 aa0.65□□□□□ -2.31
SEC1YDR164C HRI1Q05905 244 aaKnown RBP0.65□□□□□ -2.31
SEC1YDR164C FRQ1Q06389 190 aa0.65□□□□□ -2.31
SEC1YDR164C YPR172WQ06608 200 aa0.65□□□□□ -2.31
SEC1YDR164C CTR3Q06686 241 aa0.65□□□□□ -2.31
SEC1YDR164C IRC19Q07843 230 aa0.65□□□□□ -2.31
SEC1YDR164C YOL019WQ08157 551 aa0.65□□□□□ -2.31
SEC1YDR164C IRC23Q08416 157 aa0.65□□□□□ -2.31
SEC1YDR164C YOR186WQ08560 144 aa0.65□□□□□ -2.31
SEC1YDR164C FIT3Q08907 204 aa0.65□□□□□ -2.31
SEC1YDR164C YOR289WQ12012 251 aaPredicted RBP0.65□□□□□ -2.31
SEC1YDR164C FCY22Q12119 530 aa0.65□□□□□ -2.31
SEC1YDR164C YDL211CQ12121 372 aa0.65□□□□□ -2.31
SEC1YDR164C YCT1Q12235 531 aa0.65□□□□□ -2.31
SEC1YDR164C YOL107WQ12239 342 aa0.65□□□□□ -2.31
SEC1YDR164C JID1Q12350 301 aa0.65□□□□□ -2.31
SEC1YDR164C FOL3Q12676 427 aaPredicted RBP0.65□□□□□ -2.31
SEC1YDR164C YPR145C-AQ2V2P0 78 aa0.65□□□□□ -2.31
SEC1YDR164C RPS25AQ3E792 108 aaPredicted RBP0.65□□□□□ -2.31
SEC1YDR164C YER078W-AQ3E7A2 54 aa0.65□□□□□ -2.31
SEC1YDR164C YIL134C-AQ45U18 67 aa0.65□□□□□ -2.31
SEC1YDR164C YPR014CQ6B0W2 109 aa0.65□□□□□ -2.31
SEC1YDR164C HUG1Q6Q5K6 68 aa0.65□□□□□ -2.31
SEC1YDR164C UBA3Q99344 299 aa0.65□□□□□ -2.31
SEC1YDR164C UBR2Q07963 1872 aa0.65□□□□□ -2.31
SEC1YDR164C MEC1P38111 2368 aa0.65□□□□□ -2.31
SEC1YDR164C ADH2P00331 348 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C COX2P00410 251 aa0.64□□□□□ -2.31
SEC1YDR164C CDC36P06100 191 aaPredicted RBP0.64□□□□□ -2.31
SEC1YDR164C PIS1P06197 220 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C ADH3P07246 375 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C RPS8AP0CX39 200 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C RPS8BP0CX40 200 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C YHR214C-DP0CX93 97 aa0.64□□□□□ -2.31
SEC1YDR164C DPM1P14020 267 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C CUP2P15315 225 aa0.64□□□□□ -2.31
SEC1YDR164C FPR1P20081 114 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C CNB1P25296 175 aa0.64□□□□□ -2.31
SEC1YDR164C POP5P28005 173 aa0.64□□□□□ -2.31
SEC1YDR164C ALK2P32789 676 aaPredicted RBP0.64□□□□□ -2.31
SEC1YDR164C SWD2P36104 329 aaPredicted RBP0.64□□□□□ -2.31
SEC1YDR164C UTH1P36135 365 aa0.64□□□□□ -2.31
SEC1YDR164C MRPL28P36527 147 aa0.64□□□□□ -2.31
SEC1YDR164C YBR013CP38215 129 aa0.64□□□□□ -2.31
SEC1YDR164C FMP23P38231 175 aa0.64□□□□□ -2.31
SEC1YDR164C MBA1P38300 278 aa0.64□□□□□ -2.31
SEC1YDR164C DER1P38307 211 aa0.64□□□□□ -2.31
SEC1YDR164C ERV15P38312 142 aa0.64□□□□□ -2.31
SEC1YDR164C HSP10P38910 106 aa0.64□□□□□ -2.31
SEC1YDR164C PET100P38958 111 aa0.64□□□□□ -2.31
SEC1YDR164C YEA6P39953 335 aa0.64□□□□□ -2.31
SEC1YDR164C YER121WP40076 114 aa0.64□□□□□ -2.31
SEC1YDR164C AVT7P40501 490 aa0.64□□□□□ -2.31
SEC1YDR164C YIL086CP40503 102 aa0.64□□□□□ -2.31
SEC1YDR164C SYS1P41544 203 aa0.64□□□□□ -2.31
SEC1YDR164C GLR1P41921 483 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C WWM1P43582 211 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C ECO1P43605 281 aa0.64□□□□□ -2.31
SEC1YDR164C RPE1P46969 238 aa0.64□□□□□ -2.31
SEC1YDR164C MRX5P47007 382 aa0.64□□□□□ -2.31
SEC1YDR164C LSM1P47017 172 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C YJL118WP47022 219 aa0.64□□□□□ -2.31
SEC1YDR164C COX16P47081 118 aa0.64□□□□□ -2.31
SEC1YDR164C YJR015WP47090 510 aa0.64□□□□□ -2.31
SEC1YDR164C TIM21P53220 239 aa0.64□□□□□ -2.31
SEC1YDR164C HHO1P53551 258 aa0.64□□□□□ -2.31
SEC1YDR164C FMP41P53889 259 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C ACT1P60010 375 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C HAL1Q01766 294 aa0.64□□□□□ -2.31
SEC1YDR164C YPL067CQ02754 198 aa0.64□□□□□ -2.31
SEC1YDR164C YMR007WQ03675 126 aa0.64□□□□□ -2.31
SEC1YDR164C ATC1Q04005 294 aa0.64□□□□□ -2.31
SEC1YDR164C YHP1Q04116 353 aa0.64□□□□□ -2.31
SEC1YDR164C FSH2Q05015 223 aa0.64□□□□□ -2.31
SEC1YDR164C YPR127WQ06494 345 aa0.64□□□□□ -2.31
SEC1YDR164C MRX9Q07349 420 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C PBP4Q07362 185 aaKnown RBP0.64□□□□□ -2.31
SEC1YDR164C IRC25Q07951 179 aa0.64□□□□□ -2.31
SEC1YDR164C COQ10Q08058 207 aa0.64□□□□□ -2.31
SEC1YDR164C NAT5Q08689 176 aa0.64□□□□□ -2.31
SEC1YDR164C FRE8Q12209 686 aa0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms