RNA–Protein interactions for RNA: YDL196W

YDL196W, Transcript of Dubious open reading frame, yeast

Gene YDL196W, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL196W	YDL196W	RPL35A	P0CX84	120 aa	Known RBP	0.55	□□□□□ -2.32
YDL196W	YDL196W	RPL35B	P0CX85	120 aa	Known RBP	0.55	□□□□□ -2.32
YDL196W	YDL196W	TIR1	P10863	254 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	STP22	P25604	385 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	HSP30	P25619	332 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	NUF2	P33895	451 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	UPS2	P35200	230 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	PAM17	P36147	197 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	FES1	P38260	290 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	SPC25	P40014	221 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	RIO2	P40160	425 aa	Known RBP	0.55	□□□□□ -2.32
YDL196W	YDL196W	YFL019C	P43576	117 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	TTI2	P47168	421 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	SBH1	P52870	82 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	YIP3	P53633	176 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	YNL140C	P53910	189 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	YLR460C	P54007	376 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	CWC27	Q02770	301 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	MET31	Q03081	177 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	PIR1	Q03178	341 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	YMR253C	Q04835	414 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	YPR127W	Q06494	345 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	YOR015W	Q12169	119 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	DGK1	Q12382	290 aa		0.55	□□□□□ -2.32
YDL196W	YDL196W	ACC1	Q00955	2233 aa	Known RBP	0.54	□□□□□ -2.32
YDL196W	YDL196W	PBI2	P0CT04	75 aa	Known RBP	0.54	□□□□□ -2.32
YDL196W	YDL196W	RPL2A	P0CX45	254 aa	Known RBP	0.54	□□□□□ -2.32
YDL196W	YDL196W	RPL2B	P0CX46	254 aa	Known RBP	0.54	□□□□□ -2.32
YDL196W	YDL196W	PHO85	P17157	305 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	YCR023C	P25351	611 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	CLG1	P35190	452 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	0.54	□□□□□ -2.32	not detected
YDL196W	YDL196W	YKR041W	P36134	250 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	FMP23	P38231	175 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	HPA3	P39979	161 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	YER076C	P40049	302 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	SOK1	P40317	901 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	FLX1	P40464	311 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	ALB1	P47019	175 aa	Predicted RBP	0.54	□□□□□ -2.32
YDL196W	YDL196W	THG1	P53215	237 aa	Known RBP	0.54	□□□□□ -2.32
YDL196W	YDL196W	MPC3	P53311	146 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	YNL033W	P53964	284 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	HHT1	P61830	136 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	YKR005C	Q02203	525 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	UPS3	Q04006	179 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	YDR391C	Q04170	232 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	NAT3	Q06504	195 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	HRD1	Q08109	551 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	YLR053C	Q12026	108 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	DAS2	Q12084	232 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	YNL146C-A	Q3E7Z1	64 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	TRM3	Q07527	1436 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	YLR422W	Q06409	1932 aa		0.54	□□□□□ -2.32
YDL196W	YDL196W	COX8	P04039	78 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	RPS28B	P0C0X0	67 aa	Known RBP	0.53	□□□□□ -2.32
YDL196W	YDL196W	MAK31	P23059	88 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	RPB7	P34087	171 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	SRP102	P36057	244 aa	Predicted RBP	0.53	□□□□□ -2.32
YDL196W	YDL196W	RRT1	P38192	103 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	AME1	P38313	324 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	YHL042W	P38729	150 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	YHL018W	P38744	120 aa	Predicted RBP	0.53	□□□□□ -2.32
YDL196W	YDL196W	VMA22	P38784	181 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	HYR1	P40581	163 aa	Known RBP	0.53	□□□□□ -2.32
YDL196W	YDL196W	YAE1	P47118	141 aa	Predicted RBP	0.53	□□□□□ -2.32
YDL196W	YDL196W	SBH2	P52871	88 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	UBC7	Q02159	165 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	DIG2	Q03373	323 aa	Known RBP	0.53	□□□□□ -2.32
YDL196W	YDL196W	YML079W	Q03629	201 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	DML1	Q03652	475 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	RRP17	Q04031	235 aa	Predicted RBP	0.53	□□□□□ -2.32
YDL196W	YDL196W	YPD1	Q07688	167 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	ATP20	Q12233	115 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	RDI1	Q12434	202 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	YMR030W-A	Q3E760	96 aa		0.53	□□□□□ -2.32
YDL196W	YDL196W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.53	□□□□□ -2.32
YDL196W	YDL196W	STF2	P16965	84 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	PRE1	P22141	198 aa	Known RBP	0.52	□□□□□ -2.33
YDL196W	YDL196W	YBL010C	P32788	280 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	YEL073C	P39974	107 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	DLS1	P40366	167 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	MOB1	P40484	314 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	YFH7	P43591	353 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	YGL101W	P53144	215 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	EFM5	P53200	248 aa	Known RBP	0.52	□□□□□ -2.33
YDL196W	YDL196W	NQM1	P53228	333 aa	Predicted RBP	0.52	□□□□□ -2.33
YDL196W	YDL196W	LIP1	Q03579	150 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	YMR007W	Q03675	126 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	YHP1	Q04116	353 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	GAL83	Q04739	417 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	RNH202	Q05635	350 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	SYM1	Q06563	197 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	UIP4	Q08926	304 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	GRE1	Q08969	168 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	ATG41	Q12048	136 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	YDL157C	Q12082	118 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	NSL1	Q12143	216 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	MSB2	P32334	1306 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	RIF1	P29539	1916 aa		0.52	□□□□□ -2.33
YDL196W	YDL196W	VAR1	P02381	398 aa		0.51	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 80.6 ms