RNA–Protein interactions for RNA: YBR289W

SNF5, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF5, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF5YBR289W UPS2P35200 230 aa1.04□□□□□ -2.24
SNF5YBR289W CAF4P36130 643 aa1.04□□□□□ -2.24
SNF5YBR289W AME1P38313 324 aa1.04□□□□□ -2.24
SNF5YBR289W SHG1P38337 142 aa1.04□□□□□ -2.24
SNF5YBR289W AIM25P47140 327 aa1.04□□□□□ -2.24
SNF5YBR289W YDR274CP87283 123 aa1.04□□□□□ -2.24
SNF5YBR289W SML1Q04964 104 aa1.04□□□□□ -2.24
SNF5YBR289W RNH202Q05635 350 aa1.04□□□□□ -2.24
SNF5YBR289W AQY2P0CD90 149 aa1.03□□□□□ -2.24
SNF5YBR289W TRR1P29509 319 aaKnown RBP1.03□□□□□ -2.24
SNF5YBR289W SKG1P36169 355 aa1.03□□□□□ -2.24
SNF5YBR289W UMP1P38293 148 aa1.03□□□□□ -2.24
SNF5YBR289W LSM4P40070 187 aaKnown RBP1.03□□□□□ -2.24
SNF5YBR289W SKI6P46948 246 aaPredicted RBP1.03□□□□□ -2.24
SNF5YBR289W YET3Q07451 203 aa1.03□□□□□ -2.24
SNF5YBR289W PST2Q12335 198 aaKnown RBP1.03□□□□□ -2.24
SNF5YBR289W IGO2Q9P305 131 aa1.03□□□□□ -2.24
SNF5YBR289W CDC39P25655 2108 aaKnown RBP1.03□□□□□ -2.24
SNF5YBR289W TAH1P25638 111 aaPredicted RBP1.03□□□□□ -2.24
SNF5YBR289W KDX1P36005 433 aa1.03□□□□□ -2.24
SNF5YBR289W FES1P38260 290 aa1.03□□□□□ -2.24
SNF5YBR289W RPL33BP41056 107 aaKnown RBP1.03□□□□□ -2.24
SNF5YBR289W BAT2P47176 376 aaKnown RBP1.03□□□□□ -2.24
SNF5YBR289W YNL184CP53876 108 aa1.03□□□□□ -2.24
SNF5YBR289W BRX1Q08235 291 aaKnown RBP1.03□□□□□ -2.24
SNF5YBR289W TOR1P35169 2470 aa1.03□□□□□ -2.25
SNF5YBR289W QCR2P07257 368 aa1.02□□□□□ -2.25
SNF5YBR289W RPL2AP0CX45 254 aaKnown RBP1.02□□□□□ -2.25
SNF5YBR289W RPL2BP0CX46 254 aaKnown RBP1.02□□□□□ -2.25
SNF5YBR289W TRX3P25372 127 aa1.02□□□□□ -2.25
SNF5YBR289W YBR219CP38317 127 aa1.02□□□□□ -2.25
SNF5YBR289W DSE2P38844 325 aa1.02□□□□□ -2.25
SNF5YBR289W YER076CP40049 302 aa1.02□□□□□ -2.25
SNF5YBR289W AGE2P40529 298 aa1.02□□□□□ -2.25
SNF5YBR289W JAC1P53193 184 aa1.02□□□□□ -2.25
SNF5YBR289W TSC3Q3E790 80 aa1.02□□□□□ -2.25
SNF5YBR289W ROM2P51862 1356 aaKnown RBP1.02□□□□□ -2.25
SNF5YBR289W ACP1P32463 125 aa1.02□□□□□ -2.25
SNF5YBR289W CPR5P35176 225 aa1.02□□□□□ -2.25
SNF5YBR289W MTW1P39731 289 aa1.02□□□□□ -2.25
SNF5YBR289W YNL200CP40165 246 aaKnown RBP1.02□□□□□ -2.25
SNF5YBR289W RTC4P53850 401 aa1.02□□□□□ -2.25
SNF5YBR289W YNL247WP53852 767 aaKnown RBP1.02□□□□□ -2.25
SNF5YBR289W YMR315WQ04869 349 aaKnown RBP1.02□□□□□ -2.25
SNF5YBR289W YLR036CQ07986 203 aa1.02□□□□□ -2.25
SNF5YBR289W YOL024WQ08172 172 aa1.02□□□□□ -2.25
SNF5YBR289W MDM32Q12171 622 aa1.02□□□□□ -2.25
SNF5YBR289W MRPS28P21771 286 aa1.02□□□□□ -2.25
SNF5YBR289W ATG22P25568 528 aa1.02□□□□□ -2.25
SNF5YBR289W CLG1P35190 452 aa1.02□□□□□ -2.25
SNF5YBR289W MAK5P38112 773 aaPredicted RBP1.02□□□□□ -2.25
SNF5YBR289W FIG1P38224 298 aa1.02□□□□□ -2.25
SNF5YBR289W OPY1P38271 328 aa1.02□□□□□ -2.25
SNF5YBR289W AVT2P39981 480 aa1.02□□□□□ -2.25
SNF5YBR289W PDS1P40316 373 aaPredicted RBP1.02□□□□□ -2.25
SNF5YBR289W YJR111CP47148 283 aaKnown RBP1.02□□□□□ -2.25
SNF5YBR289W SOL1P50278 321 aa1.02□□□□□ -2.25
SNF5YBR289W YGL235WP53071 178 aa1.02□□□□□ -2.25
SNF5YBR289W BOL1Q3E793 110 aa1.02□□□□□ -2.25
SNF5YBR289W YIL177CP40434 1758 aa1.01□□□□□ -2.25
SNF5YBR289W YJL225CP40889 1758 aa1.01□□□□□ -2.25
SNF5YBR289W RPL25P04456 142 aaKnown RBP1.01□□□□□ -2.25
SNF5YBR289W SPO13P23624 291 aa1.01□□□□□ -2.25
SNF5YBR289W SHE2P36068 246 aaKnown RBP RIP-Chip data1.01□□□□□ -2.25not detected
SNF5YBR289W RMD6P39975 231 aa1.01□□□□□ -2.25
SNF5YBR289W TMA22P47089 198 aaPredicted RBP1.01□□□□□ -2.25
SNF5YBR289W SEC7P11075 2009 aaKnown RBP1.01□□□□□ -2.25
SNF5YBR289W ARO7P32178 256 aa1.01□□□□□ -2.25
SNF5YBR289W PEP8P40335 379 aa1.01□□□□□ -2.25
SNF5YBR289W UTP10P42945 1769 aaKnown RBP1□□□□□ -2.25
SNF5YBR289W NUP192P47054 1683 aa1□□□□□ -2.25
SNF5YBR289W MAG1P22134 296 aaKnown RBP1□□□□□ -2.25
SNF5YBR289W BET1P22804 142 aa1□□□□□ -2.25
SNF5YBR289W DER1P38307 211 aa1□□□□□ -2.25
SNF5YBR289W HMF1P40037 129 aaKnown RBP1□□□□□ -2.25
SNF5YBR289W YNL217WP40152 326 aa1□□□□□ -2.25
SNF5YBR289W YFH7P43591 353 aa1□□□□□ -2.25
SNF5YBR289W KNH1P50112 268 aa1□□□□□ -2.25
SNF5YBR289W YLR050CQ12155 161 aaKnown RBP1□□□□□ -2.25
SNF5YBR289W PET20Q99373 253 aa1□□□□□ -2.25
SNF5YBR289W APC1P53886 1748 aa1□□□□□ -2.25
SNF5YBR289W YLR236CA0A023PZG4 107 aa1□□□□□ -2.25
SNF5YBR289W MBF1O14467 151 aaKnown RBP1□□□□□ -2.25
SNF5YBR289W RPS28BP0C0X0 67 aaKnown RBP1□□□□□ -2.25
SNF5YBR289W RPS24AP0CX31 135 aaKnown RBP1□□□□□ -2.25
SNF5YBR289W RPS24BP0CX32 135 aaKnown RBP1□□□□□ -2.25
SNF5YBR289W MGT1P26188 188 aa1□□□□□ -2.25
SNF5YBR289W FZF1P32805 299 aa1□□□□□ -2.25
SNF5YBR289W YBR220CP38318 560 aa1□□□□□ -2.25
SNF5YBR289W NVJ1P38881 321 aa1□□□□□ -2.25
SNF5YBR289W EAF6P47128 113 aa1□□□□□ -2.25
SNF5YBR289W NUP49Q02199 472 aa1□□□□□ -2.25
SNF5YBR289W RRP17Q04031 235 aaPredicted RBP1□□□□□ -2.25
SNF5YBR289W PEX11Q12462 236 aa1□□□□□ -2.25
SNF5YBR289W RPS28AQ3E7X9 67 aaPredicted RBP1□□□□□ -2.25
SNF5YBR289W ODC2Q99297 307 aa1□□□□□ -2.25
SNF5YBR289W YLR419WQ06698 1435 aaKnown RBP0.99□□□□□ -2.25
SNF5YBR289W POR1P04840 283 aaKnown RBP0.99□□□□□ -2.25
SNF5YBR289W URA5P13298 226 aaKnown RBP0.99□□□□□ -2.25
SNF5YBR289W SEN2P16658 377 aa0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 88.6 ms