RNA–Protein interactions for RNA: YAL059W

ECM1, Transcript of Pre-ribosomal factor involved in 60S ribosomal protein subunit export, yeast

Gene ECM1, Length 639 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM1	YAL059W	YDR391C	Q04170	232 aa		3.9	□□□□□ -1.79
ECM1	YAL059W	MCH1	Q07376	486 aa		3.9	□□□□□ -1.79
ECM1	YAL059W	RTR2	Q12378	196 aa		3.9	□□□□□ -1.79
ECM1	YAL059W	YPL247C	Q12523	523 aa		3.9	□□□□□ -1.79
ECM1	YAL059W	DFM1	Q12743	341 aa	Known RBP	3.9	□□□□□ -1.79
ECM1	YAL059W	YER078W-A	Q3E7A2	54 aa		3.9	□□□□□ -1.79
ECM1	YAL059W	MYO2	P19524	1574 aa	Known RBP	3.89	□□□□□ -1.79
ECM1	YAL059W	YBL010C	P32788	280 aa		3.89	□□□□□ -1.79
ECM1	YAL059W	VMA11	P32842	164 aa		3.89	□□□□□ -1.79
ECM1	YAL059W	YHL026C	P38740	315 aa		3.89	□□□□□ -1.79
ECM1	YAL059W	MIG3	P39943	394 aa		3.89	□□□□□ -1.79
ECM1	YAL059W	YFL019C	P43576	117 aa		3.89	□□□□□ -1.79
ECM1	YAL059W	FSF1	Q12029	327 aa	Known RBP	3.89	□□□□□ -1.79
ECM1	YAL059W	CBP6	P07253	162 aa	Predicted RBP	3.88	□□□□□ -1.79
ECM1	YAL059W	CAX4	P53223	239 aa		3.88	□□□□□ -1.79
ECM1	YAL059W	OSH6	Q02201	448 aa		3.88	□□□□□ -1.79
ECM1	YAL059W	ISD11	Q6Q560	94 aa		3.88	□□□□□ -1.79
ECM1	YAL059W	UBR1	P19812	1950 aa		3.88	□□□□□ -1.79
ECM1	YAL059W	DUR1,2	P32528	1835 aa	Known RBP	3.88	□□□□□ -1.79
ECM1	YAL059W	ATP15	P21306	62 aa		3.87	□□□□□ -1.79
ECM1	YAL059W	YBL059W	P34224	193 aa		3.87	□□□□□ -1.79
ECM1	YAL059W	YOR062C	P36025	268 aa		3.87	□□□□□ -1.79
ECM1	YAL059W	SHB17	P36136	271 aa	Known RBP	3.87	□□□□□ -1.79
ECM1	YAL059W	YBR220C	P38318	560 aa		3.87	□□□□□ -1.79
ECM1	YAL059W	YPT31	P38555	223 aa	Known RBP	3.87	□□□□□ -1.79
ECM1	YAL059W	VPS28	Q02767	242 aa		3.87	□□□□□ -1.79
ECM1	YAL059W	SPG3	Q04398	127 aa	Predicted RBP	3.87	□□□□□ -1.79
ECM1	YAL059W	ECM19	Q06011	112 aa		3.87	□□□□□ -1.79
ECM1	YAL059W	HIS3	P06633	220 aa		3.86	□□□□□ -1.79
ECM1	YAL059W	RRT13	P40042	185 aa		3.86	□□□□□ -1.79
ECM1	YAL059W	YER134C	P40081	178 aa		3.86	□□□□□ -1.79
ECM1	YAL059W	YJL218W	P40892	196 aa	Known RBP	3.86	□□□□□ -1.79
ECM1	YAL059W	FCF2	Q12035	217 aa	Predicted RBP	3.86	□□□□□ -1.79
ECM1	YAL059W	REP2	P03872	296 aa		3.85	□□□□□ -1.79
ECM1	YAL059W	ADK1	P07170	222 aa	Known RBP	3.85	□□□□□ -1.79
ECM1	YAL059W	YER039C-A	P0CD97	72 aa		3.85	□□□□□ -1.79
ECM1	YAL059W	YKR070W	P36151	352 aa	Known RBP	3.85	□□□□□ -1.79
ECM1	YAL059W	GPI18	P38211	433 aa		3.85	□□□□□ -1.79
ECM1	YAL059W	HTD2	P38790	280 aa	Known RBP	3.85	□□□□□ -1.79
ECM1	YAL059W	PAC10	P48363	199 aa		3.85	□□□□□ -1.79
ECM1	YAL059W	BUD25	P85052	153 aa		3.85	□□□□□ -1.79
ECM1	YAL059W	NAT3	Q06504	195 aa		3.85	□□□□□ -1.79
ECM1	YAL059W	KTI11	Q3E840	82 aa		3.85	□□□□□ -1.79
ECM1	YAL059W	AHT1	P29589	182 aa		3.84	□□□□□ -1.79
ECM1	YAL059W	ETR1	P38071	380 aa		3.84	□□□□□ -1.79
ECM1	YAL059W	VTC1	P40046	129 aa	RIP-Chip data	3.84	□□□□□ -1.79	not detected
ECM1	YAL059W	REE1	P40893	198 aa		3.84	□□□□□ -1.79
ECM1	YAL059W	RSM27	P53305	110 aa		3.84	□□□□□ -1.79
ECM1	YAL059W	DML1	Q03652	475 aa		3.84	□□□□□ -1.79
ECM1	YAL059W	YAL067W-A	Q8TGK6	75 aa		3.84	□□□□□ -1.79
ECM1	YAL059W	HAP2	P06774	265 aa		3.83	□□□□□ -1.8
ECM1	YAL059W	CPA1	P07258	411 aa	Known RBP	3.83	□□□□□ -1.8
ECM1	YAL059W	RPB9	P27999	122 aa		3.83	□□□□□ -1.8
ECM1	YAL059W	ARO2	P28777	376 aa	Known RBP	3.83	□□□□□ -1.8
ECM1	YAL059W	RPL14A	P36105	138 aa	Known RBP	3.83	□□□□□ -1.8
ECM1	YAL059W	YBR242W	P38331	238 aa		3.83	□□□□□ -1.8
ECM1	YAL059W	RPL14B	P38754	138 aa	Known RBP	3.83	□□□□□ -1.8
ECM1	YAL059W	YNL200C	P40165	246 aa	Known RBP	3.83	□□□□□ -1.8
ECM1	YAL059W	MOB1	P40484	314 aa		3.83	□□□□□ -1.8
ECM1	YAL059W	ARC15	P40518	154 aa	RIP-Chip data	3.83	□□□□□ -1.8	not detected
ECM1	YAL059W	GVP36	P40531	326 aa	Known RBP	3.83	□□□□□ -1.8
ECM1	YAL059W	FLO11	P08640	1367 aa		3.83	□□□□□ -1.8
ECM1	YAL059W	SPA2	P23201	1466 aa	Known RBP	3.82	□□□□□ -1.8
ECM1	YAL059W	TRM732	Q03496	1420 aa		3.82	□□□□□ -1.8
ECM1	YAL059W	YAR023C	D6VPM8	179 aa		3.82	□□□□□ -1.8
ECM1	YAL059W	TIM9	O74700	87 aa		3.82	□□□□□ -1.8
ECM1	YAL059W	VAR1	P02381	398 aa		3.82	□□□□□ -1.8
ECM1	YAL059W	RPL9A	P05738	191 aa	Known RBP	3.82	□□□□□ -1.8
ECM1	YAL059W	SGA1	P08019	549 aa		3.82	□□□□□ -1.8
ECM1	YAL059W	SPT15	P13393	240 aa	Known RBP	3.82	□□□□□ -1.8
ECM1	YAL059W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.82	□□□□□ -1.8	not detected
ECM1	YAL059W	YAE1	P47118	141 aa	Predicted RBP	3.82	□□□□□ -1.8
ECM1	YAL059W	DSK2	P48510	373 aa		3.82	□□□□□ -1.8
ECM1	YAL059W	RPL9B	P51401	191 aa	Known RBP	3.82	□□□□□ -1.8
ECM1	YAL059W	SBH1	P52870	82 aa		3.82	□□□□□ -1.8
ECM1	YAL059W	EST3	Q03096	181 aa		3.82	□□□□□ -1.8
ECM1	YAL059W	GAL83	Q04739	417 aa		3.82	□□□□□ -1.8
ECM1	YAL059W	FYV12	Q08559	129 aa		3.82	□□□□□ -1.8
ECM1	YAL059W	HUT1	Q12520	339 aa		3.82	□□□□□ -1.8
ECM1	YAL059W	TRM3	Q07527	1436 aa		3.81	□□□□□ -1.8
ECM1	YAL059W	SPS2	P08459	502 aa		3.81	□□□□□ -1.8
ECM1	YAL059W	FYV4	P38783	130 aa	Predicted RBP	3.81	□□□□□ -1.8
ECM1	YAL059W	EMC4	P53073	190 aa		3.81	□□□□□ -1.8
ECM1	YAL059W	YGL230C	P53074	147 aa		3.81	□□□□□ -1.8
ECM1	YAL059W	RNH202	Q05635	350 aa		3.81	□□□□□ -1.8
ECM1	YAL059W	YRF1-3	P0CX14	1859 aa		3.8	□□□□□ -1.8
ECM1	YAL059W	YRF1-7	P0CX15	1859 aa		3.8	□□□□□ -1.8
ECM1	YAL059W	YRF1-6	P53819	1859 aa		3.8	□□□□□ -1.8
ECM1	YAL059W	RAD6	P06104	172 aa		3.8	□□□□□ -1.8
ECM1	YAL059W	ANB1	P19211	157 aa		3.8	□□□□□ -1.8
ECM1	YAL059W	HSP12	P22943	109 aa	Known RBP	3.8	□□□□□ -1.8
ECM1	YAL059W	RFS1	P38234	210 aa	Known RBP	3.8	□□□□□ -1.8
ECM1	YAL059W	YHR125W	P38831	101 aa		3.8	□□□□□ -1.8
ECM1	YAL059W	YPI1	P43587	155 aa		3.8	□□□□□ -1.8
ECM1	YAL059W	YDR274C	P87283	123 aa		3.8	□□□□□ -1.8
ECM1	YAL059W	YKR005C	Q02203	525 aa		3.8	□□□□□ -1.8
ECM1	YAL059W	MRPS8	Q03799	155 aa		3.8	□□□□□ -1.8
ECM1	YAL059W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
ECM1	YAL059W	TOM40	P23644	387 aa	Known RBP	3.79	□□□□□ -1.8
ECM1	YAL059W	ECM34	P38728	170 aa		3.79	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 108 ms