RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 COASYQ13057 564 aa18.27■□□□□ 0.51
CACNA1A-225ENST00000636389 KNOP1Q1ED39 458 aaKnown RBP18.27■□□□□ 0.51
CACNA1A-225ENST00000636389 UNC13DQ70J99 1090 aa18.27■□□□□ 0.51
CACNA1A-225ENST00000636389 SLC30A5Q8TAD4 765 aa18.27■□□□□ 0.51
CACNA1A-225ENST00000636389 CPA5Q8WXQ8 436 aa18.27■□□□□ 0.51
CACNA1A-225ENST00000636389 PLXNC1O60486 1568 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 FAM196BA6NMK8 535 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 DSG3P32926 999 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 ZNF157P51786 506 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 TYW3Q6IPR3 259 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 CENPLQ8N0S6 344 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 SERHL2Q9H4I8 314 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 SERHLQ9NQF3 203 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 ABHD10Q9NUJ1 306 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 SSH2Q76I76 1423 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 EMSYQ7Z589 1322 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 NPEPPSP55786 919 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 PRPF39Q86UA1 669 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 IARS2Q9NSE4 1012 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 ZMYM4Q5VZL5 1548 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 PRPF3O43395 683 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 MMP10P09238 476 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 SFNP31947 248 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 TCEAL5Q5H9L2 206 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 ZNF544Q6NX49 715 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 PRUNE1Q86TP1 453 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 TRIM43BA6NCK2 446 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 NCK2O43639 380 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 PARNO95453 639 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 DGKKQ5KSL6 1271 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 DPF3Q92784 378 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 MCEEQ96PE7 176 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 TALDO1P37837 337 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 SFSWAPQ12872 951 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 SPP2Q13103 211 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 MMRN1Q13201 1228 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 MKRN4PQ13434 485 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 C18orf8Q96DM3 657 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 CLUP10909 449 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 ZNF24P17028 368 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 KRT76Q01546 638 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 NOL9Q5SY16 702 aaKnown RBP18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 FAM45AQ8TCE6 357 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 MASTLQ96GX5 879 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 OXCT2Q9BYC2 517 aaPredicted RBP18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 TMCC3Q9ULS5 477 aa18.26■□□□□ 0.51
CACNA1A-225ENST00000636389 VWA5AO00534 786 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 ZNF618Q5T7W0 954 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 JPH1Q9HDC5 661 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 NDOR1Q9UHB4 597 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 YWHABP31946 246 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 STX3Q13277 289 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 ARMCX4Q5H9R4 360 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 FAM49BQ9NUQ9 324 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 ABI2Q9NYB9 513 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 A0A1W2PQ27 194 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 A0A1W2PQ64 194 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 A0A1W2PQD8 194 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 SH2B2O14492 632 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 ALDH9A1P49189 494 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 ZSWIM7Q19AV6 140 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 GATAD2AQ86YP4 633 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 ERLEC1Q96DZ1 483 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 FAR2Q96K12 515 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 SNX9Q9Y5X1 595 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 ASS1P00966 412 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 EPHX4Q8IUS5 362 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 IPCEF1Q8WWN9 437 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 FGFR1P11362 822 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 TMEM132BQ14DG7 1078 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 CYFIP2Q96F07 1278 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 KLHL1Q9NR64 748 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 FBXL21Q9UKT6 434 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 AGAP1Q9UPQ3 857 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 NCAM1P13591 858 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 PODNQ7Z5L7 613 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 ZNF589Q86UQ0 364 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 CYP4Z1Q86W10 505 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 FOXP4Q8IVH2 680 aaPredicted RBP18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 DNAJC1Q96KC8 554 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 TRPC4Q9UBN4 977 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 ZMYM1Q5SVZ6 1142 aa18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 TLR7Q9NYK1 1049 aaKnown RBP18.25■□□□□ 0.51
CACNA1A-225ENST00000636389 GNG14A0A1W2PPG7 69 aa18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 WDR72Q3MJ13 1102 aa18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 TDRD10Q5VZ19 366 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 TRMT6Q9UJA5 497 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 POLRMTO00411 1230 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 PROM2Q8N271 834 aa18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 CMTM5Q96DZ9 223 aa18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 RNFT2Q96EX2 444 aa18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 SERAC1Q96JX3 654 aa18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 PUS7LQ9H0K6 701 aaKnown RBP18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 HLA-DQA2P01906 255 aa18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 HIRAP54198 1017 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 VSTM4Q8IW00 320 aa18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 B3GALNT2Q8NCR0 500 aa18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 COA1Q9GZY4 146 aa18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 TAF1DQ9H5J8 278 aaPredicted RBP18.24■□□□□ 0.51
CACNA1A-225ENST00000636389 SPTLC1O15269 473 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms