RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 H7C0C1 242 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 DNALI1O14645 258 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 NCK2O43639 380 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 DKC1O60832 514 aaKnown RBP eCLIP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 NOL3O60936 208 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 DAB1O75553 588 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 SMNDC1O75940 238 aaKnown RBP eCLIP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 HEXIM1O94992 359 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 BMP10O95393 424 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 CLPTM1O96005 669 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PRG2P13727 222 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ADSLP30566 484 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PSMC2P35998 433 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ACADSBP45954 432 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 CKAP4Q07065 602 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 STRN3Q13033 797 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 TKFCQ3LXA3 575 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PLEKHG4Q58EX7 1191 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 RNF207Q6ZRF8 634 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 FASTKD5Q7L8L6 764 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PALB2Q86YC2 1186 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ALDH16A1Q8IZ83 802 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 FUKQ8N0W3 1084 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 MYCT1Q8N699 235 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 NAXEQ8NCW5 288 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 IL17RDQ8NFM7 739 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 MYCBPAPQ8TBZ2 947 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ENKURQ8TC29 256 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ATL1Q8WXF7 558 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 EYA1Q99502 592 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 EYA3Q99504 573 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 DNAJC7Q99615 494 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 CENPKQ9BS16 269 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PUS3Q9BZE2 481 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 KLHL4Q9C0H6 718 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 FAM192AQ9GZU8 254 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 MYLK2Q9H1R3 596 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 EPN3Q9H201 632 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 WASH6PQ9NQA3 447 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 RNF19AQ9NV58 838 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 INTS9Q9NV88 658 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 CCDC87Q9NVE4 849 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 WWOXQ9NZC7 414 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 SAMM50Q9Y512 469 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 TRPM3Q9HCF6 1732 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 H0YJX3 145 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 RASGRF2O14827 1237 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PFKFB2O60825 505 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 NPTXRO95502 500 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 OXSR1O95747 527 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ITGB3P05106 788 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 P4HBP07237 508 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 P4HA1P13674 534 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ITGALP20701 1170 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 GUCY1A2P33402 732 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 CTNNB1P35222 781 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 GGCXP38435 758 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 SLC9A3P48764 834 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 GPR85P60893 370 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 RBL2Q08999 1139 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 STX3Q13277 289 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PPIL2Q13356 520 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 MORC3Q14149 939 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 RCN2Q14257 317 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 DSC3Q14574 896 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 LPIN1Q14693 890 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 TMEM266Q2M3C6 531 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ARL13BQ3SXY8 428 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 GPATCH4Q5T3I0 446 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 HECTD3Q5T447 861 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 LCE2DQ5TA82 110 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ALS2CLQ60I27 953 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PLEKHA7Q6IQ23 1121 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 PGM2L1Q6PCE3 622 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 TRIM72Q6ZMU5 477 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 TOGARAM2Q6ZUX3 1019 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 NLRC3Q7RTR2 1065 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 R3HCC1LQ7Z5L2 792 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 FBXO33Q7Z6M2 555 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 RALYLQ86SE5 291 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 USP37Q86T82 979 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 CDR2LQ86X02 465 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 NME9Q86XW9 330 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 CD302Q8IX05 232 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ARFGAP2Q8N6H7 521 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 ANKFN1Q8N957 763 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 OTUD7AQ8TE49 926 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 MRPS27Q92552 414 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 INTS12Q96CB8 462 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 TRMT2BQ96GJ1 504 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 GAS2L1Q99501 681 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 NAPGQ99747 312 aaPredicted RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 LMAN2LQ9H0V9 348 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 NOL6Q9H6R4 1146 aaKnown RBP4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 HMG20BQ9P0W2 317 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 TBC1D14Q9P2M4 693 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 TSPYL4Q9UJ04 414 aa4.08□□□□□ -1.76
R3HDM1-220ENST00000628915 SNX14Q9Y5W7 946 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms