RNA–Protein interactions for RNA: ENST00000621790.4

TARDBP-226, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-226ENST00000621790 BAG1Q99933 345 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-226ENST00000621790 SMYD3Q9H7B4 428 aa12.44□□□□□ -0.42
TARDBP-226ENST00000621790 L1RE1Q9UN81 338 aa12.44□□□□□ -0.42
TARDBP-226ENST00000621790 PRG3Q9Y2Y8 225 aaPredicted RBP12.44□□□□□ -0.42
TARDBP-226ENST00000621790 PCDHA11Q9Y5I1 949 aa12.44□□□□□ -0.42
TARDBP-226ENST00000621790 MRPL42Q9Y6G3 142 aaKnown RBP12.44□□□□□ -0.42
TARDBP-226ENST00000621790 H0YGN5 161 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 H7C4K7 107 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 MED7O43513 233 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 B4GALT3O60512 393 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 OAZ2O95190 189 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 EFEMP2O95967 443 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 RB1P06400 928 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 FGFR3P22607 806 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 USP8P40818 1118 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 PDE6CP51160 858 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 PLCB3Q01970 1234 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 YWHAHQ04917 246 aaPredicted RBP12.43□□□□□ -0.42
TARDBP-226ENST00000621790 SHHQ15465 462 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 MAPRE1Q15691 268 aaKnown RBP12.43□□□□□ -0.42
TARDBP-226ENST00000621790 RAB30Q15771 203 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 SCARA3Q6AZY7 606 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 PPP1R2P3Q6NXS1 205 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 SCARA5Q6ZMJ2 495 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 ANKS3Q6ZW76 656 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 DDX53Q86TM3 631 aaKnown RBP12.43□□□□□ -0.42
TARDBP-226ENST00000621790 CRYBG2Q8N1P7 616 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 OR6B3Q8NGW1 331 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 TMEM169Q96HH4 297 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 TMEM176AQ96HP8 235 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 ACBD6Q9BR61 282 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.43□□□□□ -0.421e-7■■■■□ 22.4
TARDBP-226ENST00000621790 MARCH5Q9NX47 278 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 AJAP1Q9UKB5 411 aaPredicted RBP12.43□□□□□ -0.42
TARDBP-226ENST00000621790 LZTS1Q9Y250 596 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 SSX2IPQ9Y2D8 614 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 STXBP5LQ9Y2K9 1186 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 SCN1AP35498 2009 aa12.43□□□□□ -0.42
TARDBP-226ENST00000621790 A8MXQ7 604 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 CYP26A1O43174 497 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 ARHGAP6O43182 974 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 VDRP11473 427 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 CYP11B1P15538 503 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 CD58P19256 250 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 CLCN1P35523 988 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 BRCC3P46736 316 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 NDST1P52848 882 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 RAD23BP54727 409 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 CDH8P55286 799 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 CREMQ03060 361 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 UBE3AQ05086 875 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 SMARCB1Q12824 385 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 BMS1Q14692 1282 aaKnown RBP12.42□□□□□ -0.42
TARDBP-226ENST00000621790 USP41Q3LFD5 358 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 TDRD12Q587J7 1177 aaKnown RBP12.42□□□□□ -0.42
TARDBP-226ENST00000621790 C9orf50Q5SZB4 431 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 WSCD1Q658N2 575 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 OVOS1Q6IE37 1185 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 WDR59Q6PJI9 974 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 TRIM72Q6ZMU5 477 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 RNF168Q8IYW5 571 aaPredicted RBP12.42□□□□□ -0.42
TARDBP-226ENST00000621790 KBTBD7Q8WVZ9 684 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 TRIM44Q96DX7 344 aaPredicted RBP12.42□□□□□ -0.42
TARDBP-226ENST00000621790 CCDC42Q96M95 316 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 MRPL45Q9BRJ2 306 aaKnown RBP12.42□□□□□ -0.42
TARDBP-226ENST00000621790 TTPALQ9BTX7 342 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 SDCBP2Q9H190 292 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 CACNG4Q9UBN1 327 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 PUF60Q9UHX1 559 aaKnown RBP12.42□□□□□ -0.42
TARDBP-226ENST00000621790 CDH9Q9ULB4 789 aa12.42□□□□□ -0.42
TARDBP-226ENST00000621790 OR6C75A6NL08 312 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 C5orf67F2Z3F1 127 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 SOD2P04179 222 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 ITGB1P05556 798 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 GNA15P30679 374 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 CYLC1P35663 651 aaPredicted RBP12.41□□□□□ -0.42
TARDBP-226ENST00000621790 BMPR1AP36894 532 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 MRPL58Q14197 206 aaKnown RBP12.41□□□□□ -0.42
TARDBP-226ENST00000621790 SGO2Q562F6 1265 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 FAM171A1Q5VUB5 890 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 HGSNATQ68CP4 663 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 ZNF280DQ6N043 979 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 TMCO2Q7Z6W1 182 aaPredicted RBP12.41□□□□□ -0.42
TARDBP-226ENST00000621790 TXLNBQ8N3L3 684 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 SLC4A11Q8NBS3 891 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 EPS8L1Q8TE68 723 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 WHAMMQ8TF30 809 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 RABGGTAQ92696 567 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 HERC2P3Q9BVR0 1158 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 DEF6Q9H4E7 631 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 HAUS4Q9H6D7 363 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 LUC7LQ9NQ29 371 aaKnown RBP12.41□□□□□ -0.42
TARDBP-226ENST00000621790 DDX43Q9NXZ2 648 aaKnown RBP12.41□□□□□ -0.42
TARDBP-226ENST00000621790 MSRAQ9UJ68 235 aa12.41□□□□□ -0.42
TARDBP-226ENST00000621790 A0A1W2PPC1 479 aa12.4□□□□□ -0.42
TARDBP-226ENST00000621790 IPO7O95373 1038 aaKnown RBP12.4□□□□□ -0.42
TARDBP-226ENST00000621790 LSM8O95777 96 aaKnown RBP12.4□□□□□ -0.42
TARDBP-226ENST00000621790 LINC00271P0C7V0 271 aa12.4□□□□□ -0.42
TARDBP-226ENST00000621790 RAP1GAPP47736 663 aa12.4□□□□□ -0.42
TARDBP-226ENST00000621790 TSPY1Q01534 308 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms