RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 ARPP21Q9UBL0 812 aaPredicted RBP5.59□□□□□ -1.51
BRIP1-202ENST00000577598 LPAR3Q9UBY5 353 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 SPO11Q9Y5K1 396 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 FAM47DPA6NHR8 397 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 MASP2O00187 686 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 SMAD9O15198 467 aaKnown RBP5.59□□□□□ -1.51
BRIP1-202ENST00000577598 TUSC2O75896 110 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 BCL10O95999 233 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 SUPT20HL2P0C7V6 817 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 RPS6KB1P23443 525 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 CHMP24386 653 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 LSSP48449 732 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 MMP16P51512 607 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 ARSFP54793 590 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 MTTPP55157 894 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 PLAURQ03405 335 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 ITGB3BPQ13352 177 aaPredicted RBP5.59□□□□□ -1.51
BRIP1-202ENST00000577598 IFI16Q16666 785 aaKnown RBP5.59□□□□□ -1.51
BRIP1-202ENST00000577598 SUPT20HL1Q3ZLR7 823 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 TMEM201Q5SNT2 666 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 RINT1Q6NUQ1 792 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 ARMCX2Q7L311 632 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.59□□□□□ -1.51
BRIP1-202ENST00000577598 DDI1Q8WTU0 396 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 ROBO4Q8WZ75 1007 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 TSEN34Q9BSV6 310 aaKnown RBP5.59□□□□□ -1.51
BRIP1-202ENST00000577598 EMILIN2Q9BXX0 1053 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 CARD9Q9H257 536 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 SARS2Q9NP81 518 aaKnown RBP5.59□□□□□ -1.51
BRIP1-202ENST00000577598 RBM28Q9NW13 759 aaKnown RBP5.59□□□□□ -1.51
BRIP1-202ENST00000577598 HMG20BQ9P0W2 317 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 RWDD3Q9Y3V2 267 aa5.59□□□□□ -1.51
BRIP1-202ENST00000577598 SYNRGQ9UMZ2 1314 aa5.59□□□□□ -1.52
BRIP1-202ENST00000577598 LINC01387J3KSC0 135 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 TP73O15350 636 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 MEFVO15553 781 aaPredicted RBP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 CCP110O43303 1012 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 SGTAO43765 313 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 SERPINC1P01008 464 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 PITPNBP48739 271 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 TRIM25Q14258 630 aaKnown RBP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 CNGA2Q16280 664 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 CYB5RLQ6IPT4 315 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 TOM1L2Q6ZVM7 507 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.58□□□□□ -1.524e-6■■□□□ 11.9
BRIP1-202ENST00000577598 APIPQ96GX9 242 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 ZNF396Q96N95 335 aaPredicted RBP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 SLX1AQ9BQ83 275 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 EDEM2Q9BV94 578 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 EPC1Q9H2F5 836 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 SNX15Q9NRS6 342 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 WHRNQ9P202 907 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 AJAP1Q9UKB5 411 aaPredicted RBP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 PCDHA5Q9Y5H7 936 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 IRS2Q9Y4H2 1338 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 CAPN14A8MX76 684 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 H0Y626 953 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 J3KTA2 159 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 NKRFO15226 690 aaKnown RBP eCLIP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 SMNDC1O75940 238 aaKnown RBP eCLIP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 ADH1CP00326 375 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 CYP17A1P05093 508 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 HOXB3P14651 431 aaPredicted RBP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 AARSP49588 968 aaKnown RBP eCLIP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 GPR85P60893 370 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 PDK1Q15118 436 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 MIGA2Q7L4E1 593 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 SIX6OS1Q8N1H7 587 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 AFAP1Q8N556 730 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 NSUN7Q8NE18 718 aaKnown RBP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 SELENOMQ8WWX9 145 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 ATP6V0A1Q93050 837 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 AGXT2Q9BYV1 514 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 NUCKS1Q9H1E3 243 aaKnown RBP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 NELFAQ9H3P2 528 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 ZNF304Q9HCX3 659 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 ADPRHL2Q9NX46 363 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 LIMA1Q9UHB6 759 aaKnown RBP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 C2orf71A6NGG8 1288 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 IFNL4K9M1U5 179 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 RGS10O43665 173 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 CBX7O95931 251 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 PSMA3P25788 255 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 MFAP4P55083 255 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 SOX8P57073 446 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 RAPSNQ13702 412 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 MYBPC3Q14896 1274 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 RCN1Q15293 331 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 ZSCAN23Q3MJ62 389 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 KHDC1Q4VXA5 237 aaKnown RBP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 FAXCQ5TGI0 409 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 ERASQ7Z444 233 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 DPP9Q86TI2 863 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 ARMC8Q8IUR7 673 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 PHC2Q8IXK0 858 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 OR13H1Q8NG92 308 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 RMDN1Q96DB5 314 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 NTPCRQ9BSD7 190 aaKnown RBP5.58□□□□□ -1.52
BRIP1-202ENST00000577598 COLEC11Q9BWP8 271 aa5.58□□□□□ -1.52
BRIP1-202ENST00000577598 KIAA1683Q9H0B3 1180 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms