RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 SLITRK3O94933 977 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 DEXIO95424 95 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 FTH1P19P0C7X4 201 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 ATP2B1P20020 1258 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 DDX6P26196 483 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMG6-219ENST00000575663 GJA4P35212 333 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 GRM5P41594 1212 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 ABCG1P45844 678 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 GALK1P51570 392 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 EFNA5P52803 228 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 SOX4Q06945 474 aaPredicted RBP6.43□□□□□ -1.38
SMG6-219ENST00000575663 DUSP4Q13115 394 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 BYSLQ13895 437 aaKnown RBP6.43□□□□□ -1.38
SMG6-219ENST00000575663 TRIP6Q15654 476 aaKnown RBP6.43□□□□□ -1.38
SMG6-219ENST00000575663 DUOXA1Q1HG43 343 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 ZNF568Q3ZCX4 644 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 PEAR1Q5VY43 1037 aaPredicted RBP6.43□□□□□ -1.38
SMG6-219ENST00000575663 EEF1DP3Q658K8 133 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 TRIM68Q6AZZ1 485 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 CCNI2Q6ZMN8 369 aaPredicted RBP6.43□□□□□ -1.38
SMG6-219ENST00000575663 DNAJB7Q7Z6W7 309 aaPredicted RBP6.43□□□□□ -1.38
SMG6-219ENST00000575663 ZNF605Q86T29 641 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 TTC30AQ86WT1 665 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 POTEDQ86YR6 584 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 CMTM8Q8IZV2 173 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 MINDY1Q8N5J2 469 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 MDGA1Q8NFP4 955 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 MDM1Q8TC05 714 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 WHAMMQ8TF30 809 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 SLC39A7Q92504 469 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 HAS1Q92839 578 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 BRF1Q92994 677 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 ATP2A3Q93084 1043 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 CHFRQ96EP1 664 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 NACC1Q96RE7 527 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 FAM83CQ9BQN1 747 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 ESYT1Q9BSJ8 1104 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 POLR3CQ9BUI4 534 aaPredicted RBP6.43□□□□□ -1.38
SMG6-219ENST00000575663 CCDC113Q9H0I3 377 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 HSFX1Q9UBD0 423 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 DKK4Q9UBT3 224 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 SLC6A14Q9UN76 642 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 GCN1Q92616 2671 aaKnown RBP6.43□□□□□ -1.38
SMG6-219ENST00000575663 DOCK6Q96HP0 2047 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 NBEAQ8NFP9 2946 aa6.43□□□□□ -1.38
SMG6-219ENST00000575663 ADAMTS20P59510 1910 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 MTMR11A4FU01 709 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 CAPN8A6NHC0 703 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 TTLL13PA6NNM8 815 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 CPLX1O14810 134 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 CAPN9O14815 690 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 AP5Z1O43299 807 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 SYPP08247 313 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 SERPINF2P08697 491 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 OR4Q2P0C623 313 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 XRCC6P12956 609 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMG6-219ENST00000575663 PLA2G2AP14555 144 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 ARSAP15289 507 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 KCNE1P15382 129 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 XBP1P17861 261 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 P2RY2P41231 377 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 PTGER3P43115 390 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 IFNAR2P48551 515 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 TUFMP49411 452 aaKnown RBP6.42□□□□□ -1.38
SMG6-219ENST00000575663 OSTNP61366 133 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 FAM193AP78312 1265 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 SSRP1Q08945 709 aaKnown RBP6.42□□□□□ -1.38
SMG6-219ENST00000575663 NR1H3Q13133 447 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 GPR17Q13304 367 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 SLC14A1Q13336 389 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 MYBPC2Q14324 1141 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 NTRK3Q16288 839 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 ADCK5Q3MIX3 580 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 MGAT5BQ3V5L5 792 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 XKR4Q5GH76 650 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 ARMCX5Q6P1M9 558 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 CPLX2Q6PUV4 134 aaKnown RBP6.42□□□□□ -1.38
SMG6-219ENST00000575663 Q6ZUG5 572 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 NAXDQ8IW45 347 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 SCUBE3Q8IX30 993 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 TMEFF1Q8IYR6 380 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 LSM14AQ8ND56 463 aaKnown RBP6.42□□□□□ -1.38
SMG6-219ENST00000575663 OLIG1Q8TAK6 271 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 PIGOQ8TEQ8 1089 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 IFT74Q96LB3 600 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 SEPT5Q99719 369 aaPredicted RBP6.42□□□□□ -1.38
SMG6-219ENST00000575663 SMG9Q9H0W8 520 aaKnown RBP6.42□□□□□ -1.38
SMG6-219ENST00000575663 ECT2Q9H8V3 914 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 POLMQ9NP87 494 aaPredicted RBP6.42□□□□□ -1.38
SMG6-219ENST00000575663 TDP1Q9NUW8 608 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 DNAAF2Q9NVR5 837 aaKnown RBP6.42□□□□□ -1.38
SMG6-219ENST00000575663 CNTN3Q9P232 1028 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 BCCIPQ9P287 314 aaKnown RBP eCLIP6.42□□□□□ -1.38
SMG6-219ENST00000575663 MBD1Q9UIS9 605 aaPredicted RBP6.42□□□□□ -1.38
SMG6-219ENST00000575663 MMP17Q9ULZ9 603 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 TBX20Q9UMR3 447 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 PCDHA12Q9UN75 941 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 TNFSF13BQ9Y275 285 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 RAI2Q9Y5P3 530 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms