RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	MAN2A1	Q16706	1144 aa		7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	GFOD2	Q3B7J2	385 aa		7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	MINDY4	Q4G0A6	757 aa		7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ZNF385B	Q569K4	471 aa		7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	MUM1L1	Q5H9M0	696 aa		7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	MFSD14B	Q5SR56	506 aa		7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	IFIT1B	Q5T764	474 aa	Known RBP	7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	APOBEC3H	Q6NTF7	200 aa	Known RBP	7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	BTNL9	Q6UXG8	535 aa		7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ERO1B	Q86YB8	467 aa		7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ZFPM1	Q8IX07	1006 aa		7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	BCL6B	Q8N143	479 aa	Predicted RBP	7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	PAWR	Q96IZ0	340 aa	Known RBP	7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	MPHOSPH8	Q99549	860 aa		7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	FDXACB1	Q9BRP7	624 aa	Predicted RBP	7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	SAP30BP	Q9UHR5	308 aa	Known RBP	7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	MYH3	P11055	1940 aa		7.11	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ARAP2	Q8WZ64	1704 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	MUC3A	Q02505	3323 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911		A0A1W2PPC1	479 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	PRC1	O43663	620 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	KRT1	P04264	644 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	CYP1A1	P04798	512 aa	Predicted RBP	7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	GSPT1	P15170	499 aa	Known RBP	7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	AKAP5	P24588	427 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	KCNJ4	P48050	445 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	SARS	P49591	514 aa	Known RBP	7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	FLT3LG	P49771	235 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	PRMT2	P55345	433 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	CD69	Q07108	199 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	TOP3A	Q13472	1001 aa	Predicted RBP	7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	SNAPC2	Q13487	334 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ANKRD23	Q86SG2	305 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ADGRG2	Q8IZP9	1017 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	GLB1L3	Q8NCI6	653 aa	Predicted RBP	7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	RAET1E	Q8TD07	263 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	RELT	Q969Z4	430 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	KAZALD1	Q96I82	304 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	GUCD1	Q96NT3	240 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	DEFB118	Q96PH6	123 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	HTATIP2	Q9BUP3	242 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ADI1	Q9BV57	179 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	TMEM168	Q9H0V1	697 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ZNF112	Q9UJU3	913 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	STXBP5L	Q9Y2K9	1186 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	RNF114	Q9Y508	228 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	NR2E3	Q9Y5X4	410 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	PRUNE2	Q8WUY3	3088 aa		7.1	□□□□□ -1.27
HERPUD1-208	ENST00000563911	CDH23	Q9H251	3354 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	DAPK3	O43293	454 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	AP1G1	O43747	822 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	SEC24D	O94855	1032 aa	Predicted RBP	7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	FSBP	O95073	299 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	HNRNPL	P14866	589 aa	Known RBP eCLIP	7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	MAGEA10	P43363	369 aa	Predicted RBP	7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	MEOX1	P50221	254 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	PPAT	Q06203	517 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	DLX2	Q07687	328 aa	Predicted RBP	7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	KIF22	Q14807	665 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ARHGEF6	Q15052	776 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ZNF648	Q5T619	568 aa	Predicted RBP	7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	CCDC30	Q5VVM6	783 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	MCTP2	Q6DN12	878 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911		Q6ZUG5	572 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	EPM2AIP1	Q7L775	607 aa	Predicted RBP	7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ZNF804A	Q7Z570	1209 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	NRG4	Q8WWG1	115 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	COA7	Q96BR5	231 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	AIFM3	Q96NN9	605 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	SPATA25	Q9BR10	227 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	OSBPL6	Q9BZF3	934 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ZCCHC17	Q9NP64	241 aa	Known RBP	7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	DMRT3	Q9NQL9	472 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	GABBR1	Q9UBS5	961 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	RAPGEFL1	Q9UHV5	662 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	SERPINB13	Q9UIV8	391 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	INTU	Q9ULD6	942 aa		7.09	□□□□□ -1.27
HERPUD1-208	ENST00000563911	ANKRD18B	A2A2Z9	1011 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	SH3D21	A4FU49	640 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	OFD1	O75665	1012 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	DDX58	O95786	925 aa	Known RBP	7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	TFRC	P02786	760 aa	Known RBP	7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	POU2F2	P09086	479 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	LPO	P22079	712 aa	Predicted RBP	7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	HIBADH	P31937	336 aa	Known RBP	7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	ETV4	P43268	484 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	TBX4	P57082	545 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	GNAI1	P63096	354 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	LRIT3	Q3SXY7	679 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	VWA3B	Q502W6	1294 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	TRIM68	Q6AZZ1	485 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	KLHDC10	Q6PID8	442 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	FAM180A	Q6UWF9	173 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	CATIP	Q7Z7H3	387 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	PPP1R14C	Q8TAE6	165 aa		7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	NKD2	Q969F2	451 aa	Predicted RBP	7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	GFM2	Q969S9	779 aa	Known RBP	7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	YTHDC1	Q96MU7	727 aa	Known RBP	7.08	□□□□□ -1.28
HERPUD1-208	ENST00000563911	CD320	Q9NPF0	282 aa		7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms