RNA–Protein interactions for RNA: ENST00000559406.5

TNFAIP2-205, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 1,799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-205ENST00000559406 DAAM1Q9Y4D1 1078 aa17.41■□□□□ 0.38
TNFAIP2-205ENST00000559406 PCDHB4Q9Y5E5 795 aa17.41■□□□□ 0.38
TNFAIP2-205ENST00000559406 CDH23Q9H251 3354 aa17.41■□□□□ 0.38
TNFAIP2-205ENST00000559406 GABRDO14764 452 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 HUS1O60921 280 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 CYP11A1P05108 521 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 CA3P07451 260 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 P4HA1P13674 534 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 USP8P40818 1118 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 STAT1P42224 750 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 NDST1P52848 882 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 ARID5AQ03989 594 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 KIAA0319Q5VV43 1072 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 HGSNATQ68CP4 663 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 RBBP8NLQ8NC74 664 aaPredicted RBP17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 C17orf80Q9BSJ5 609 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 PBX4Q9BYU1 374 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 DPEP3Q9H4B8 488 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 RRAGDQ9NQL2 400 aaPredicted RBP17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 AIPL1Q9NZN9 384 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 PCDHB8Q9UN66 801 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 PLEKP08567 350 aaPredicted RBP17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 SKILP12757 684 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 KRT5P13647 590 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 WARSP23381 471 aaKnown RBP17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 HNRNPH3P31942 346 aaKnown RBP17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 RAD23BP54727 409 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 HS1BP3Q53T59 392 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 FAM171A1Q5VUB5 890 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 CHRDL2Q6WN34 429 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 DPH6Q7L8W6 267 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 SLC47A2Q86VL8 602 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 TMEM139Q8IV31 216 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 CNGA4Q8IV77 575 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 SLC4A11Q8NBS3 891 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 OR8K1Q8NGG5 319 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 JAKMIP2Q96AA8 810 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 ZSWIM1Q9BR11 485 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 MYO6Q9UM54 1294 aa17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 BARX2Q9UMQ3 279 aaPredicted RBP17.4■□□□□ 0.38
TNFAIP2-205ENST00000559406 ATG2AQ2TAZ0 1938 aa17.39■□□□□ 0.38
TNFAIP2-205ENST00000559406 ODC1P11926 461 aa17.39■□□□□ 0.37
TNFAIP2-205ENST00000559406 FGFR3P22607 806 aa17.39■□□□□ 0.37
TNFAIP2-205ENST00000559406 ACAT1P24752 427 aaKnown RBP17.39■□□□□ 0.37
TNFAIP2-205ENST00000559406 RTP2Q5QGT7 225 aa17.39■□□□□ 0.37
TNFAIP2-205ENST00000559406 SFMBT2Q5VUG0 894 aa17.39■□□□□ 0.37
TNFAIP2-205ENST00000559406 TDHQ8IZJ6 230 aa17.39■□□□□ 0.37
TNFAIP2-205ENST00000559406 OR6B3Q8NGW1 331 aa17.39■□□□□ 0.37
TNFAIP2-205ENST00000559406 FAM81BQ96LP2 452 aa17.39■□□□□ 0.37
TNFAIP2-205ENST00000559406 CHP1Q99653 195 aa17.39■□□□□ 0.37
TNFAIP2-205ENST00000559406 SPG21Q9NZD8 308 aa17.39■□□□□ 0.37
TNFAIP2-205ENST00000559406 SF3B1O75533 1304 aaKnown RBP eCLIP17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 ATP2C2O75185 946 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 PDGFRBP09619 1106 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 CDR1P51861 262 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 MLLT1Q03111 559 aaPredicted RBP17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 MEA1Q16626 185 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 KLHL23Q8NBE8 558 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 ZNF397Q8NF99 534 aaPredicted RBP17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 SLC20A1Q8WUM9 679 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 TMEM209Q96SK2 561 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 ARHGAP20Q9P2F6 1191 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 STXBP5LQ9Y2K9 1186 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 PCDHA11Q9Y5I1 949 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 ESPNB1AK53 854 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 FGF18O76093 207 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 CFHP08603 1231 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 TPM1P09493 284 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 TYMPP19971 482 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 FECHP22830 423 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 PAX3P23760 479 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 GNL1P36915 607 aaPredicted RBP17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 TAP1Q03518 808 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 ASIC2Q16515 512 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 NOP9Q86U38 636 aaKnown RBP17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 CEP57Q86XR8 500 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 OR10T2Q8NGX3 314 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 TFAP2BQ92481 460 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 SYN2Q92777 582 aaPredicted RBP17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 ZNF830Q96NB3 372 aaPredicted RBP17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 PANX2Q96RD6 677 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 SYT11Q9BT88 431 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 KCNF1Q9H3M0 494 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 DDX43Q9NXZ2 648 aaKnown RBP17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 MTUS1Q9ULD2 1270 aa17.38■□□□□ 0.37
TNFAIP2-205ENST00000559406 PTPRDP23468 1912 aa17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 A8MXQ7 604 aa17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 SSTR3P32745 418 aaPredicted RBP17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 BMPR1AP36894 532 aa17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 GSDMDP57764 484 aa17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 PSMC1P62191 440 aaKnown RBP17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 MRPL58Q14197 206 aaKnown RBP17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 VARS2Q5ST30 1063 aaKnown RBP17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 RSPO2Q6UXX9 243 aaPredicted RBP17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 ACOT1Q86TX2 421 aa17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 LRRC8AQ8IWT6 810 aa17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 TMEM86AQ8N2M4 240 aa17.37■□□□□ 0.37
TNFAIP2-205ENST00000559406 C12orf29Q8N999 325 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms