RNA–Protein interactions for RNA: ENST00000549621.5

RITA1-202, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RITA1, Length 2,041 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-202ENST00000549621 DAB2IPQ5VWQ8 1189 aa23.09■■□□□ 1.29
RITA1-202ENST00000549621 PRELID2Q8N945 189 aa23.09■■□□□ 1.29
RITA1-202ENST00000549621 EIF1ADQ8N9N8 165 aaKnown RBP23.09■■□□□ 1.29
RITA1-202ENST00000549621 FEZF2Q8TBJ5 459 aa23.09■■□□□ 1.29
RITA1-202ENST00000549621 ABT1Q9ULW3 272 aaKnown RBP23.09■■□□□ 1.29
RITA1-202ENST00000549621 DERAQ9Y315 318 aa23.09■■□□□ 1.29
RITA1-202ENST00000549621 PDCD11Q14690 1871 aaKnown RBP23.09■■□□□ 1.29
RITA1-202ENST00000549621 PHF2O75151 1096 aa23.09■■□□□ 1.29
RITA1-202ENST00000549621 TSEN2Q8NCE0 465 aaKnown RBP23.09■■□□□ 1.29
RITA1-202ENST00000549621 ZMAT2Q96NC0 199 aaKnown RBP23.09■■□□□ 1.29
RITA1-202ENST00000549621 NXF3Q9H4D5 531 aaKnown RBP23.09■■□□□ 1.29
RITA1-202ENST00000549621 HES2Q9Y543 173 aa23.09■■□□□ 1.29
RITA1-202ENST00000549621 TLR3O15455 904 aaKnown RBP23.08■■□□□ 1.29
RITA1-202ENST00000549621 DUSP11O75319 330 aaKnown RBP23.08■■□□□ 1.29
RITA1-202ENST00000549621 CYBAP13498 195 aa23.08■■□□□ 1.29
RITA1-202ENST00000549621 P4HA1P13674 534 aa23.08■■□□□ 1.29
RITA1-202ENST00000549621 GABPB1Q06547 395 aaPredicted RBP23.08■■□□□ 1.29
RITA1-202ENST00000549621 CUL1Q13616 776 aa23.08■■□□□ 1.29
RITA1-202ENST00000549621 SIX1Q15475 284 aaPredicted RBP23.08■■□□□ 1.29
RITA1-202ENST00000549621 SEC14L1Q92503 715 aa23.08■■□□□ 1.29
RITA1-202ENST00000549621 DDX27Q96GQ7 796 aaKnown RBP23.08■■□□□ 1.29
RITA1-202ENST00000549621 LHX5Q9H2C1 402 aa23.08■■□□□ 1.29
RITA1-202ENST00000549621 CEP83Q9Y592 693 aa23.08■■□□□ 1.29
RITA1-202ENST00000549621 POLR3GO15318 223 aaPredicted RBP23.08■■□□□ 1.28
RITA1-202ENST00000549621 MED7O43513 233 aa23.08■■□□□ 1.28
RITA1-202ENST00000549621 MAN1A1P33908 653 aa23.08■■□□□ 1.28
RITA1-202ENST00000549621 PTPN11Q06124 597 aaPredicted RBP23.08■■□□□ 1.28
RITA1-202ENST00000549621 DDX42Q86XP3 938 aaKnown RBP eCLIP23.08■■□□□ 1.28
RITA1-202ENST00000549621 TRIB2Q92519 343 aa23.08■■□□□ 1.28
RITA1-202ENST00000549621 TRIM51Q9BSJ1 452 aa23.08■■□□□ 1.28
RITA1-202ENST00000549621 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.08■■□□□ 1.28
RITA1-202ENST00000549621 GABRQQ9UN88 632 aa23.08■■□□□ 1.28
RITA1-202ENST00000549621 O00370 1275 aa23.07■■□□□ 1.28
RITA1-202ENST00000549621 AXLP30530 894 aa23.07■■□□□ 1.28
RITA1-202ENST00000549621 TAS2R40P59535 323 aa23.07■■□□□ 1.28
RITA1-202ENST00000549621 RPL7AP62424 266 aaKnown RBP23.07■■□□□ 1.28
RITA1-202ENST00000549621 INCA1Q0VD86 236 aa23.07■■□□□ 1.28
RITA1-202ENST00000549621 DNAJC24Q6P3W2 148 aa23.07■■□□□ 1.28
RITA1-202ENST00000549621 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.07■■□□□ 1.28
RITA1-202ENST00000549621 CYTH4Q9UIA0 394 aa23.07■■□□□ 1.28
RITA1-202ENST00000549621 TMEM191CA6NGB0 347 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 RECQL4O94761 1208 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 C6orf222P0C671 652 aaPredicted RBP23.06■■□□□ 1.28
RITA1-202ENST00000549621 PSMC4P43686 418 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 FCGRTP55899 365 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 DR1Q01658 176 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 ZNF252P-AS1Q0IIN9 211 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 ZBTB6Q15916 424 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 CYP1B1Q16678 543 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 PTPN20Q4JDL3 420 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 PPP1R15BQ5SWA1 713 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 ERICH1Q86X53 443 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 C7orf31Q8N865 590 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.06■■□□□ 1.28
RITA1-202ENST00000549621 C18orf8Q96DM3 657 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 TMEM176AQ96HP8 235 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 TUBGCP4Q9UGJ1 667 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 PIN4Q9Y237 131 aaKnown RBP23.06■■□□□ 1.28
RITA1-202ENST00000549621 AGPSO00116 658 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 PSTPIP1O43586 416 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 CHRNA3P32297 505 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 YARSP54577 528 aaKnown RBP23.06■■□□□ 1.28
RITA1-202ENST00000549621 DHX34Q14147 1143 aaKnown RBP23.06■■□□□ 1.28
RITA1-202ENST00000549621 CYP4A22Q5TCH4 519 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 TTC27Q6P3X3 843 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 NEUROG2Q9H2A3 272 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 CNTN3Q9P232 1028 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 IP6K2Q9UHH9 426 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 SCN1AP35498 2009 aa23.06■■□□□ 1.28
RITA1-202ENST00000549621 SCN10AQ9Y5Y9 1956 aa23.05■■□□□ 1.28
RITA1-202ENST00000549621 PPEF2O14830 753 aa23.05■■□□□ 1.28
RITA1-202ENST00000549621 DAPK3O43293 454 aa23.05■■□□□ 1.28
RITA1-202ENST00000549621 RARAP10276 462 aa23.05■■□□□ 1.28
RITA1-202ENST00000549621 CRYBB1P53674 252 aaPredicted RBP23.05■■□□□ 1.28
RITA1-202ENST00000549621 GJA9P57773 515 aa23.05■■□□□ 1.28
RITA1-202ENST00000549621 HLTFQ14527 1009 aaKnown RBP eCLIP23.05■■□□□ 1.28
RITA1-202ENST00000549621 UBXN11Q5T124 520 aa23.05■■□□□ 1.28
RITA1-202ENST00000549621 ALKAL1Q6UXT8 129 aa23.05■■□□□ 1.28
RITA1-202ENST00000549621 MCEEQ96PE7 176 aa23.05■■□□□ 1.28
RITA1-202ENST00000549621 MED4Q9NPJ6 270 aa23.05■■□□□ 1.28
RITA1-202ENST00000549621 BARX2Q9UMQ3 279 aaPredicted RBP23.05■■□□□ 1.28
RITA1-202ENST00000549621 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.05■■□□□ 1.28
RITA1-202ENST00000549621 FAM187AA6NFU0 413 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 FSCN2O14926 492 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 SYF2O95926 243 aaKnown RBP23.04■■□□□ 1.28
RITA1-202ENST00000549621 GNAT1P11488 350 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 PTGIRP43119 386 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 OGDHQ02218 1023 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 JAMLQ86YT9 394 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 RHOT1Q8IXI2 618 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 MREGQ8N565 214 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 C3orf20Q8ND61 904 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 FAM71BQ8TC56 605 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 MAGOHBQ96A72 148 aaKnown RBP23.04■■□□□ 1.28
RITA1-202ENST00000549621 C18orf25Q96B23 403 aaPredicted RBP23.04■■□□□ 1.28
RITA1-202ENST00000549621 PLVAPQ9BX97 442 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 TRIM6Q9C030 488 aaPredicted RBP23.04■■□□□ 1.28
RITA1-202ENST00000549621 FAM124BQ9H5Z6 455 aaPredicted RBP23.04■■□□□ 1.28
RITA1-202ENST00000549621 PRDM10Q9NQV6 1147 aa23.04■■□□□ 1.28
RITA1-202ENST00000549621 TJP2Q9UDY2 1190 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms