RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 SPACA7Q96KW9 195 aa12.11□□□□□ -0.47
CTNNA1-234ENST00000522227 CNOT6LQ96LI5 555 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-234ENST00000522227 ARID3AQ99856 593 aa12.11□□□□□ -0.47
CTNNA1-234ENST00000522227 SLC46A2Q9BY10 475 aa12.11□□□□□ -0.47
CTNNA1-234ENST00000522227 CLMPQ9H6B4 373 aa12.11□□□□□ -0.47
CTNNA1-234ENST00000522227 TASP1Q9H6P5 420 aa12.11□□□□□ -0.47
CTNNA1-234ENST00000522227 BCCIPQ9P287 314 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTNNA1-234ENST00000522227 PILRBQ9UKJ0 227 aa12.11□□□□□ -0.47
CTNNA1-234ENST00000522227 TRIP11Q15643 1979 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 A0A087WV48 116 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 CYP3A7-CYP3A51PA0A087WV96 503 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 SMIM28A0A1B0GU29 152 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 FAM149AA5PLN7 773 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 IGHDP01880 384 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 CYP3A7P24462 503 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 MARCKSP29966 332 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 GJA4P35212 333 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 P2RY2P41231 377 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 AMPD2Q01433 879 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 BFSP1Q12934 665 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 PPP2R5CQ13362 524 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 PLD1Q13393 1074 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 TTC22Q5TAA0 569 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 PPP4R3AQ6IN85 833 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 CC2D1AQ6P1N0 951 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 RASSF3Q86WH2 238 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 NAXDQ8IW45 347 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 SCUBE3Q8IX30 993 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 PGBD3Q8N328 593 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 TMEM130Q8N3G9 435 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 CCDC148Q8NFR7 591 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 DDX12PQ92771 950 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 GCNAQ96QF7 691 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 LPIN3Q9BQK8 851 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 NFKBIZQ9BYH8 718 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 ZSWIM4Q9H7M6 989 aa12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 POLMQ9NP87 494 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-234ENST00000522227 PRPF3O43395 683 aaKnown RBP12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 SERPINF2P08697 491 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 HNRNPLP14866 589 aaKnown RBP eCLIP12.09□□□□□ -0.478e-7■□□□□ 10.2
CTNNA1-234ENST00000522227 CFHR1Q03591 330 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 INF2Q27J81 1249 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 CCDC157Q569K6 752 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 MAB21L3Q8N8X9 362 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 CEP120Q8N960 986 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 ATAD1Q8NBU5 361 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 RIN3Q8TB24 985 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 USP33Q8TEY7 942 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 PSMG2Q969U7 264 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 C18orf25Q96B23 403 aaPredicted RBP12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 PRIMPOLQ96LW4 560 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 TBC1D32Q96NH3 1257 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 PNMA5Q96PV4 448 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 RWDD1Q9H446 243 aaPredicted RBP12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 FZD8Q9H461 694 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 KALRNO60229 2985 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 PTPRBP23467 1997 aa12.09□□□□□ -0.47
CTNNA1-234ENST00000522227 ARHGAP33O14559 1287 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 CAPN9O14815 690 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 DGAT1O75907 488 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 AVPR1AP37288 418 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 NBR1Q14596 966 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 TMEM92Q6UXU6 159 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 CMTM8Q8IZV2 173 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 CPA6Q8N4T0 437 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 APPL2Q8NEU8 664 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 OLIG1Q8TAK6 271 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 PIGOQ8TEQ8 1089 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 GIPC2Q8TF65 315 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 SETD7Q8WTS6 366 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 HMGB4Q8WW32 186 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 EXOC4Q96A65 974 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 SUSD3Q96L08 255 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 ZMAT2Q96NC0 199 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 FCRL3Q96P31 734 aaPredicted RBP12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 SEPT5Q99719 369 aaPredicted RBP12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 CAPN10Q9HC96 672 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 TBX20Q9UMR3 447 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 TNRC6BQ9UPQ9 1833 aaKnown RBP12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 MYO16Q9Y6X6 1858 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 MYO18BQ8IUG5 2567 aa12.08□□□□□ -0.48
CTNNA1-234ENST00000522227 ALDH1A2O94788 518 aa12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 FGF19O95750 216 aa12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 NMT1P30419 496 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 YARSP54577 528 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 RPL6Q02878 288 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 KCNC4Q03721 635 aa12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 TAF12Q16514 161 aa12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 CRY1Q16526 586 aa12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 DCAF4L1Q3SXM0 396 aa12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 TMPRSS7Q7RTY8 843 aa12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 CEP76Q8TAP6 659 aa12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 USP13Q92995 863 aaPredicted RBP12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 LSG1Q9H089 658 aaKnown RBP12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 PRORYQ9H606 182 aa12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 ECT2Q9H8V3 914 aa12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 PRDM16Q9HAZ2 1276 aa12.07□□□□□ -0.48
CTNNA1-234ENST00000522227 ZDHHC4Q9NPG8 344 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms