RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 PYDC1Q8WXC3 89 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 CEP44Q9C0F1 390 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 KANSL2Q9H9L4 492 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 KCNK13Q9HB14 408 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 IGSF5Q9NSI5 407 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 PCDHA4Q9UN74 947 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 PTPN22Q9Y2R2 807 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 RBMX2Q9Y388 322 aaKnown RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 SNX9Q9Y5X1 595 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 MAD1L1Q9Y6D9 718 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 A0A0G2JND7 137 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 IQCA1LA6NCM1 817 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 KDM1AO60341 852 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 C6orf222P0C671 652 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 RBP3P10745 1247 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 EEF2P13639 858 aaKnown RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 ZNF12P17014 697 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 COILP38432 576 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 KPNA1P52294 538 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 GALCP54803 685 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 EVA1CP58658 441 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 UBE4AQ14139 1066 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 NIPAL1Q6NVV3 410 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 ZNF804AQ7Z570 1209 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 PTCD2Q8WV60 388 aaKnown RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 EME1Q96AY2 570 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 TTC25Q96NG3 672 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 STRBPQ96SI9 672 aaKnown RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 C2orf49Q9BVC5 232 aaPredicted RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 VTA1Q9NP79 307 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 TMA7Q9Y2S6 64 aaKnown RBP12.66□□□□□ -0.38
SPIDR-217ENST00000522117 COL4A3BPQ9Y5P4 624 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 IGSF9BQ9UPX0 1349 aa12.66□□□□□ -0.38
SPIDR-217ENST00000522117 ABCA3Q99758 1704 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 CYP1A2P05177 515 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 ACTN1P12814 892 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 TATP17735 454 aaPredicted RBP12.65□□□□□ -0.38
SPIDR-217ENST00000522117 PHBP35232 272 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 FDFT1P37268 417 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 PIK3CAP42336 1068 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 CDK9P50750 372 aaKnown RBP12.65□□□□□ -0.38
SPIDR-217ENST00000522117 NR1H3Q13133 447 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 RASGRF1Q13972 1273 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 LRP8Q14114 963 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 RASA2Q15283 850 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 CLUL1Q15846 466 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 FAM91A1Q658Y4 838 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 CAPN12Q6ZSI9 719 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 MFSD6Q6ZSS7 791 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 C11orf74Q86VG3 221 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 AHI1Q8N157 1196 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 SLC35G2Q8TBE7 412 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 DDI1Q8WTU0 396 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 ZC3H15Q8WU90 426 aaKnown RBP12.65□□□□□ -0.38
SPIDR-217ENST00000522117 RAPGEF4Q8WZA2 1011 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 MTBPQ96DY7 904 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 MKNK1Q9BUB5 465 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.65□□□□□ -0.381e-6■■■■□ 22.4
SPIDR-217ENST00000522117 MAN1C1Q9NR34 630 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 TBC1D23Q9NUY8 699 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 BTG4Q9NY30 223 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 NCANO14594 1321 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 FRMPD4Q14CM0 1322 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 ANKRD34BA5PLL1 514 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 H3BRJ5 948 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 THAP12O43422 761 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 DNAJA2O60884 412 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 MTRF1O75570 445 aaKnown RBP12.65□□□□□ -0.38
SPIDR-217ENST00000522117 HSPA6P17066 643 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 MZF1P28698 734 aaPredicted RBP12.65□□□□□ -0.38
SPIDR-217ENST00000522117 KCNJ1P48048 391 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 NR1H2P55055 460 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 NCKAP1LP55160 1127 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 CREB5Q02930 508 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 WASHC5Q12768 1159 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 CALCOCO2Q13137 446 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 ARHGEF6Q15052 776 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 SEPT7Q16181 437 aaKnown RBP12.65□□□□□ -0.38
SPIDR-217ENST00000522117 PHKG1Q16816 387 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 PCNX4Q63HM2 1172 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 IFNL3Q8IZI9 196 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 RNF169Q8NCN4 708 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 OLIG1Q8TAK6 271 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 GCNAQ96QF7 691 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 THTPAQ9BU02 230 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 PLVAPQ9BX97 442 aa12.65□□□□□ -0.38
SPIDR-217ENST00000522117 TCRBV7S2A1N4TA0A589 114 aa12.64□□□□□ -0.39
SPIDR-217ENST00000522117 FCHO1O14526 889 aa12.64□□□□□ -0.39
SPIDR-217ENST00000522117 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
SPIDR-217ENST00000522117 THRAP10827 490 aa12.64□□□□□ -0.39
SPIDR-217ENST00000522117 GCAP28676 217 aa12.64□□□□□ -0.39
SPIDR-217ENST00000522117 CSE1LP55060 971 aaKnown RBP12.64□□□□□ -0.39
SPIDR-217ENST00000522117 CYP1B1Q16678 543 aa12.64□□□□□ -0.39
SPIDR-217ENST00000522117 LLGL2Q6P1M3 1020 aa12.64□□□□□ -0.39
SPIDR-217ENST00000522117 KYAT3Q6YP21 454 aaKnown RBP12.64□□□□□ -0.39
SPIDR-217ENST00000522117 ZNF276Q8N554 614 aa12.64□□□□□ -0.39
SPIDR-217ENST00000522117 TMEM120AQ9BXJ8 343 aa12.64□□□□□ -0.39
SPIDR-217ENST00000522117 TRABDQ9H4I3 376 aa12.64□□□□□ -0.39
SPIDR-217ENST00000522117 ZNF287Q9HBT7 754 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms