RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 C3orf58Q8NDZ4 430 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 KRTAP3-3Q9BYR6 98 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 KRTAP3-2Q9BYR7 98 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 PBX4Q9BYU1 374 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 GANQ9H2C0 597 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 SNX25Q9H3E2 840 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 APOBEC3GQ9HC16 384 aaKnown RBP13.3□□□□□ -0.28
SNX17-208ENST00000493711 SIX2Q9NPC8 291 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 MARCH5Q9NX47 278 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 DNAJC12Q9UKB3 198 aa13.3□□□□□ -0.28
SNX17-208ENST00000493711 LAMA2P24043 3122 aaKnown RBP13.3□□□□□ -0.28
SNX17-208ENST00000493711 TMEM265A0A087WTH1 108 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 LCHNA4D1U4 455 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 FGF18O76093 207 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 SOD2P04179 222 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 LINC00271P0C7V0 271 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 FGFR3P22607 806 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 WARSP23381 471 aaKnown RBP13.29□□□□□ -0.28
SNX17-208ENST00000493711 PCSK1P29120 753 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 POLR2FP61218 127 aaKnown RBP13.29□□□□□ -0.28
SNX17-208ENST00000493711 SOWAHAQ2M3V2 549 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 PPP2R2DQ66LE6 453 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 SPOPLQ6IQ16 392 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 PDE12Q6L8Q7 609 aaKnown RBP13.29□□□□□ -0.28
SNX17-208ENST00000493711 KIAA1841Q6NSI8 718 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 ANKS3Q6ZW76 656 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 DRC7Q8IY82 874 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 ADGRF2Q8IZF7 708 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 RABGGTAQ92696 567 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 TATDN2Q93075 761 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 SPAG5Q96R06 1193 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 TTPALQ9BTX7 342 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 HERC2P3Q9BVR0 1158 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 NAA15Q9BXJ9 866 aaKnown RBP13.29□□□□□ -0.28
SNX17-208ENST00000493711 RYDENQ9NUL5 291 aaKnown RBP13.29□□□□□ -0.28
SNX17-208ENST00000493711 IMPACTQ9P2X3 320 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 HCSTQ9UBK5 93 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 BARX2Q9UMQ3 279 aaPredicted RBP13.29□□□□□ -0.28
SNX17-208ENST00000493711 CAPN11Q9UMQ6 739 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 LUC7L2Q9Y383 392 aaKnown RBP13.29□□□□□ -0.28
SNX17-208ENST00000493711 EYSQ5T1H1 3165 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 RALGAPA2Q2PPJ7 1873 aa13.29□□□□□ -0.28
SNX17-208ENST00000493711 NT5C1B-RDH14C9J2C7 533 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 NOL4O94818 638 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 OAZ2O95190 189 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 EFEMP2O95967 443 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 NUDT7P0C024 238 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 DNAJB2P25686 324 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 STAT1P42224 750 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 BRCC3P46736 316 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 BPIFB4P59827 614 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 ZBED6P86452 979 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 TAP1Q03518 808 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 YWHAHQ04917 246 aaPredicted RBP13.28□□□□□ -0.28
SNX17-208ENST00000493711 INCA1Q0VD86 236 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 RAPGEF1Q13905 1077 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 TSR1Q2NL82 804 aaKnown RBP13.28□□□□□ -0.28
SNX17-208ENST00000493711 FAM171A1Q5VUB5 890 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 OVOS1Q6IE37 1185 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 IQCEQ6IPM2 695 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 DPY19L2P1Q6NXN4 242 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 RRAGAQ7L523 313 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 TMC6Q7Z403 805 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 CNGA4Q8IV77 575 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 ARHGEF19Q8IW93 802 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 PLPP6Q8IY26 295 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 RNF168Q8IYW5 571 aaPredicted RBP13.28□□□□□ -0.28
SNX17-208ENST00000493711 PDCL2Q8N4E4 241 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 KLHL23Q8NBE8 558 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 HASPINQ8TF76 798 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 SHC3Q92529 594 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 SYN2Q92777 582 aaPredicted RBP13.28□□□□□ -0.28
SNX17-208ENST00000493711 TIFAQ96CG3 184 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 TNIP3Q96KP6 325 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 GPR62Q9BZJ7 368 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 NKX2-4Q9H2Z4 354 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.28□□□□□ -0.28
SNX17-208ENST00000493711 CISHQ9NSE2 258 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 CACNG4Q9UBN1 327 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 KIAA1257Q9ULG3 409 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 L1RE1Q9UN81 338 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 POLIQ9UNA4 740 aa13.28□□□□□ -0.28
SNX17-208ENST00000493711 YBX2Q9Y2T7 364 aaKnown RBP13.28□□□□□ -0.28
SNX17-208ENST00000493711 OR6C75A6NL08 312 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 GABRDO14764 452 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 LPXNO60711 386 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 ITGB1P05556 798 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 URODP06132 367 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 WEE2P0C1S8 567 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 MYOGP15173 224 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 GNL1P36915 607 aaPredicted RBP13.27□□□□□ -0.29
SNX17-208ENST00000493711 PBX3P40426 434 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 GLUD2P49448 558 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 KLK7P49862 253 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 DRAP1Q14919 205 aaPredicted RBP13.27□□□□□ -0.29
SNX17-208ENST00000493711 MAPRE1Q15691 268 aaKnown RBP13.27□□□□□ -0.29
SNX17-208ENST00000493711 WSCD1Q658N2 575 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 ZNF280DQ6N043 979 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 SCARA5Q6ZMJ2 495 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 OR6B3Q8NGW1 331 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms