RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 SPATA31A3Q5VYP0 1347 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 LRRC3CA6NJW4 275 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 ADM5C9JUS6 153 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 GCOM1H8Y6P7 765 aaPredicted RBP4.33□□□□□ -1.72
NF1-213ENST00000489712 URI1O94763 535 aaPredicted RBP4.33□□□□□ -1.72
NF1-213ENST00000489712 IL33O95760 270 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 WT1P19544 449 aaPredicted RBP4.33□□□□□ -1.72
NF1-213ENST00000489712 ITGALP20701 1170 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 LMO1P25800 156 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 HK3P52790 923 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 KIF22Q14807 665 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 TSTD2Q5T7W7 516 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 SLC30A10Q6XR72 485 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 TSHZ1Q6ZSZ6 1077 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 FAM90A1Q86YD7 464 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 PSD4Q8NDX1 1056 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 POC1BQ8TC44 478 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 PBKQ96KB5 322 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 FAM167AQ96KS9 214 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 OSBPL9Q96SU4 736 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 ALG8Q9BVK2 526 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 C1orf43Q9BWL3 253 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 KLC4Q9NSK0 619 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 ABCF2Q9UG63 623 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 ZDHHC8Q9ULC8 765 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 FRMD4BQ9Y2L6 1034 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 PCDHA3Q9Y5H8 950 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 TNFRSF18Q9Y5U5 241 aa4.33□□□□□ -1.72
NF1-213ENST00000489712 ADGRA2Q96PE1 1338 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 LINC00473A8K010 186 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 F5H697 171 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 RBMXL2O75526 392 aaKnown RBP4.32□□□□□ -1.72
NF1-213ENST00000489712 TTLL1O95922 423 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 CDK4P11802 303 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 PDCP20941 246 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 LPOP22079 712 aaPredicted RBP4.32□□□□□ -1.72
NF1-213ENST00000489712 SOX10P56693 466 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 HABP2Q14520 560 aaPredicted RBP4.32□□□□□ -1.72
NF1-213ENST00000489712 FAM153CQ494X1 144 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 TAF2Q6P1X5 1199 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 USP45Q70EL2 814 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 PTF1AQ7RTS3 328 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 HEATR3Q7Z4Q2 680 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 DDX17Q92841 729 aaKnown RBP4.32□□□□□ -1.72
NF1-213ENST00000489712 TNPO1Q92973 898 aaKnown RBP4.32□□□□□ -1.72
NF1-213ENST00000489712 TPSD1Q9BZJ3 242 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 KMT5AQ9NQR1 393 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 LMBRD1Q9NUN5 540 aa4.32□□□□□ -1.72
NF1-213ENST00000489712 LUC7L2Q9Y383 392 aaKnown RBP4.32□□□□□ -1.72
NF1-213ENST00000489712 WDR27A2RRH5 827 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 M0QYG6 137 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 RHOP08100 348 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 CHRM3P20309 590 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 CD6P30203 668 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 HNRNPMP52272 730 aaKnown RBP eCLIP4.31□□□□□ -1.726e-6■■■■□ 20.3
NF1-213ENST00000489712 MAP2K6P52564 334 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 PROK1P58294 105 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 TCF15Q12870 199 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 PGS1Q32NB8 556 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 BRDTQ58F21 947 aaPredicted RBP4.31□□□□□ -1.72
NF1-213ENST00000489712 RBM20Q5T481 1227 aaKnown RBP4.31□□□□□ -1.72
NF1-213ENST00000489712 TEDDM1Q5T9Z0 273 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 CPA6Q8N4T0 437 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 FBXO41Q8TF61 875 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 FKBP10Q96AY3 582 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 HSPBAP1Q96EW2 488 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 ACTRT3Q9BYD9 372 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 BRINP2Q9C0B6 783 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 SMOC2Q9H3U7 446 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.31□□□□□ -1.72
NF1-213ENST00000489712 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.31□□□□□ -1.72
NF1-213ENST00000489712 WNT6Q9Y6F9 365 aa4.31□□□□□ -1.72
NF1-213ENST00000489712 VPS4BO75351 444 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 NXPH3O95157 252 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 KIF20AO95235 890 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 TYRP14679 529 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 VCAM1P19320 739 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 IBSPP21815 317 aaPredicted RBP4.3□□□□□ -1.72
NF1-213ENST00000489712 PHKA1P46020 1223 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 NEK2P51955 445 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 PTPROQ16827 1216 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 CCDC157Q569K6 752 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 PLAC9Q5JTB6 97 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 ZNF788Q6ZQV5 615 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 PPP1R32Q7Z5V6 425 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 CATIPQ7Z7H3 387 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 AMIGO2Q86SJ2 522 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 PRR18Q8N4B5 295 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 BRIX1Q8TDN6 353 aaKnown RBP4.3□□□□□ -1.72
NF1-213ENST00000489712 FAM136AQ96C01 138 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 HAPLN3Q96S86 360 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 NUP88Q99567 741 aaPredicted RBP4.3□□□□□ -1.72
NF1-213ENST00000489712 GTPBP4Q9BZE4 634 aaKnown RBP4.3□□□□□ -1.72
NF1-213ENST00000489712 MRPL46Q9H2W6 279 aaKnown RBP4.3□□□□□ -1.72
NF1-213ENST00000489712 EHD3Q9NZN3 535 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 AGAP1Q9UPQ3 857 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 RAD54BQ9Y620 910 aa4.3□□□□□ -1.72
NF1-213ENST00000489712 PRSS29PA6NIE9 313 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 VWC2LB2RUY7 222 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms