RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 ALX1Q15699 326 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 CYP27C1Q4G0S4 372 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 HEATR6Q6AI08 1181 aaKnown RBP6.05□□□□□ -1.44
PTPN4-210ENST00000485247 KIAA1211LQ6NV74 962 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 DNAJC14Q6Y2X3 702 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-210ENST00000485247 ZNF574Q6ZN55 896 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-210ENST00000485247 CEP68Q76N32 757 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 IQCA1Q86XH1 822 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 PLD6Q8N2A8 252 aaKnown RBP6.05□□□□□ -1.44
PTPN4-210ENST00000485247 TOP6BLQ8N6T0 577 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 ESR2Q92731 530 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 LPPQ93052 612 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 GAL3ST3Q96A11 431 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 GPRASP2Q96D09 838 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 MTMR8Q96EF0 704 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 BBC3Q96PG8 261 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-210ENST00000485247 PIGSQ96S52 555 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 DUSP9Q99956 384 aaKnown RBP6.05□□□□□ -1.44
PTPN4-210ENST00000485247 KXD1Q9BQD3 176 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 NT5C3AQ9H0P0 336 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 SMOC1Q9H4F8 434 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 HEBP1Q9NRV9 189 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 TBC1D13Q9NVG8 400 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 DNAJB4Q9UDY4 337 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 CDH7Q9ULB5 785 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 PCDHA4Q9UN74 947 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 INPP5FQ9Y2H2 1132 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 MRPS17Q9Y2R5 130 aaKnown RBP6.05□□□□□ -1.44
PTPN4-210ENST00000485247 MYH15Q9Y2K3 1946 aa6.05□□□□□ -1.44
PTPN4-210ENST00000485247 NEDD4P46934 1319 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 MAST4O15021 2626 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 SHISA7A6NL88 538 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 KLRF2D3W0D1 207 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 B4GALT3O60512 393 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 ZNF806P0C7X5 589 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 FGFR4P22455 802 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 EIF4BP23588 611 aaKnown RBP6.04□□□□□ -1.44
PTPN4-210ENST00000485247 CXCL12P48061 93 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 NTHL1P78549 312 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 SATB1Q01826 763 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 MTMR1Q13613 665 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 INPP5AQ14642 412 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 ZBTB37Q5TC79 503 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 USP17L6PQ6QN14 398 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-210ENST00000485247 CBLL1Q75N03 491 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 MTSS1LQ765P7 747 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 PLPPR4Q7Z2D5 763 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 GRASPQ7Z6J2 395 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-210ENST00000485247 PALB2Q86YC2 1186 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 TBC1D10CQ8IV04 446 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 TP53INP2Q8IXH6 220 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 METTL13Q8N6R0 699 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 SMARCC2Q8TAQ2 1214 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 CDHR1Q96JP9 859 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 ZNF668Q96K58 619 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-210ENST00000485247 FRMD6Q96NE9 622 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 RPS6KC1Q96S38 1066 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 PHF20Q9BVI0 1012 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 ADAMTS10Q9H324 1103 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 LMAN1LQ9HAT1 526 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 SSU72Q9NP77 194 aaKnown RBP6.04□□□□□ -1.44
PTPN4-210ENST00000485247 SLC9A2Q9UBY0 812 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 CYP8B1Q9UNU6 501 aa6.04□□□□□ -1.44
PTPN4-210ENST00000485247 ZFP37Q9Y6Q3 630 aaPredicted RBP6.04□□□□□ -1.44
PTPN4-210ENST00000485247 ADAMTS20P59510 1910 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 MEIS3P2A8K0S8 358 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 HBP1O60381 514 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 URODP06132 367 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 CNR2P34972 360 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 CLCN3P51790 818 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 OXCT1P55809 520 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 NLRP11P59045 1033 aaKnown RBP6.03□□□□□ -1.44
PTPN4-210ENST00000485247 ACTR2P61160 394 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 TRAF1Q13077 416 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 LRRC14Q15048 493 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 SLC35G1Q2M3R5 365 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 COL28A1Q2UY09 1125 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 NOMO2Q5JPE7 1267 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 SCARA3Q6AZY7 606 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 LRFN4Q6PJG9 635 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 GLB1LQ6UWU2 654 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 SV2BQ7L1I2 683 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 FAM214BQ7L5A3 538 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 TAS1R1Q7RTX1 841 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 TRMT1LQ7Z2T5 733 aaKnown RBP6.03□□□□□ -1.44
PTPN4-210ENST00000485247 LONP2Q86WA8 852 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 ZNF280BQ86YH2 543 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 LURAP1LQ8IV03 231 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 ENAHQ8N8S7 591 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-210ENST00000485247 PIBF1Q8WXW3 757 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 FGF13Q92913 245 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 HEXIM2Q96MH2 286 aaKnown RBP6.03□□□□□ -1.44
PTPN4-210ENST00000485247 PLEKHA4Q9H4M7 779 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 RNF41Q9H4P4 317 aaPredicted RBP6.03□□□□□ -1.44
PTPN4-210ENST00000485247 ZDHHC7Q9NXF8 308 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 DACT1Q9NYF0 836 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 MAD2L2Q9UI95 211 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 AK5Q9Y6K8 562 aa6.03□□□□□ -1.44
PTPN4-210ENST00000485247 NBEAQ8NFP9 2946 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms