RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 HUS1O60921 280 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 CXCL14O95715 111 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 FAM163BP0C2L3 166 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 NDUFV1P49821 464 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 MYL7Q01449 175 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 KCNH2Q12809 1159 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 KCNJ12Q14500 433 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 PSMD5Q16401 504 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 MAN2A1Q16706 1144 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 DUSP6Q16828 381 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 TCP11X2Q5H9J9 407 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 SLC8B1Q6J4K2 584 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 ZNF280DQ6N043 979 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 CEP57Q86XR8 500 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 DHX40Q8IX18 779 aaKnown RBP16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 AOPEPQ8N6M6 819 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 AUTS2Q8WXX7 1259 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 HSD3B7Q9H2F3 369 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 FANCLQ9NW38 375 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 RAB20Q9NX57 234 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 L1RE1Q9UN81 338 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 SNX9Q9Y5X1 595 aa16.03■□□□□ 0.16
CDC42SE1-203ENST00000470278 CACNA1HO95180 2353 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 GTPBP10A4D1E9 387 aaKnown RBP16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 SMTNL1A8MU46 457 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 C2CD2LO14523 706 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 LINC01565O15544 149 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 TBC1D4O60343 1298 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 CSPG5O95196 566 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 ADH1AP07327 375 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 CNPP09543 421 aaKnown RBP16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 MTIF2P46199 727 aaKnown RBP16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 ZNF445P59923 1031 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 TNNC1P63316 161 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 NOP14P78316 857 aaKnown RBP16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 CETN1Q12798 172 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 IQCB1Q15051 598 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 WDR72Q3MJ13 1102 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 ZNF667Q5HYK9 610 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 OVOS1Q6IE37 1185 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 PRSS55Q6UWB4 352 aaPredicted RBP16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 LRSAM1Q6UWE0 723 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 ADGRD2Q7Z7M1 963 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 PPFIBP1Q86W92 1011 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 PDCL2Q8N4E4 241 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 CCDC150Q8NCX0 1101 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 KLHL5Q96PQ7 755 aa16.02■□□□□ 0.16
CDC42SE1-203ENST00000470278 PLXNA3P51805 1871 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 GABRDO14764 452 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 TEX28O15482 410 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 NCK2O43639 380 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 TACC1O75410 805 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 P4HA1P13674 534 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 ASPAP45381 313 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 KCNC3Q14003 757 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 SOWAHAQ2M3V2 549 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 MIIPQ5JXC2 388 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 METTL23Q86XA0 190 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 ADGRF2Q8IZF7 708 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 FAM200AQ8TCP9 573 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 SEMA4DQ92854 862 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 CLSTN3Q9BQT9 956 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 TUBGCP2Q9BSJ2 902 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 NIF3L1Q9GZT8 377 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 FAM124BQ9H5Z6 455 aaPredicted RBP16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 TLE6Q9H808 572 aa16.01■□□□□ 0.15
CDC42SE1-203ENST00000470278 OR6C75A6NL08 312 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 PRR33A8MZF0 331 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 CLASP2O75122 1294 aaKnown RBP16■□□□□ 0.15
CDC42SE1-203ENST00000470278 WARSP23381 471 aaKnown RBP16■□□□□ 0.15
CDC42SE1-203ENST00000470278 CA8P35219 290 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 NRIP1P48552 1158 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 LHX1P48742 406 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 CLCN4P51793 760 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 VWA3BQ502W6 1294 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 HSP90AA4PQ58FG1 418 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 WSCD1Q658N2 575 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 EFHBQ8N7U6 833 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 ANKRD20A12PQ8NF67 263 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 LMO3Q8TAP4 145 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 KBTBD7Q8WVZ9 684 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 BCO2Q9BYV7 579 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 NDST4Q9H3R1 872 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 APOBEC3GQ9HC16 384 aaKnown RBP16■□□□□ 0.15
CDC42SE1-203ENST00000470278 CBX8Q9HC52 389 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 CLDND1Q9NY35 253 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 LIMA1Q9UHB6 759 aaKnown RBP16■□□□□ 0.15
CDC42SE1-203ENST00000470278 FBXL5Q9UKA1 691 aa16■□□□□ 0.15
CDC42SE1-203ENST00000470278 TIMM13Q9Y5L4 95 aaPredicted RBP16■□□□□ 0.15
CDC42SE1-203ENST00000470278 USP34Q70CQ2 3546 aa15.99■□□□□ 0.15
CDC42SE1-203ENST00000470278 BECN2A8MW95 431 aa15.99■□□□□ 0.15
CDC42SE1-203ENST00000470278 RAB33AQ14088 237 aa15.99■□□□□ 0.15
CDC42SE1-203ENST00000470278 KRT31Q15323 416 aa15.99■□□□□ 0.15
CDC42SE1-203ENST00000470278 CLUL1Q15846 466 aa15.99■□□□□ 0.15
CDC42SE1-203ENST00000470278 CTXN3Q4LDR2 81 aa15.99■□□□□ 0.15
CDC42SE1-203ENST00000470278 WDR44Q5JSH3 913 aa15.99■□□□□ 0.15
CDC42SE1-203ENST00000470278 SPOPLQ6IQ16 392 aa15.99■□□□□ 0.15
CDC42SE1-203ENST00000470278 RSPO2Q6UXX9 243 aaPredicted RBP15.99■□□□□ 0.15
CDC42SE1-203ENST00000470278 TMEM184AQ6ZMB5 413 aa15.99■□□□□ 0.15
CDC42SE1-203ENST00000470278 MMS19Q96T76 1030 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms