RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 GALNT1Q10472 559 aaPredicted RBP11.27□□□□□ -0.6
LINC00342-202ENST00000448494 NCOA4Q13772 614 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 PTK2BQ14289 1009 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 EXOC3L4Q17RC7 722 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 CCDC58Q4VC31 144 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 C1orf146Q5VVC0 180 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 AGMOQ6ZNB7 445 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 NLRP10Q86W26 655 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 MINDY2Q8NBR6 621 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 GIMAP8Q8ND71 665 aaPredicted RBP11.27□□□□□ -0.6
LINC00342-202ENST00000448494 VMP1Q96GC9 406 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 CDHR1Q96JP9 859 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 RIOK1Q9BRS2 568 aaKnown RBP11.27□□□□□ -0.6
LINC00342-202ENST00000448494 RNF38Q9H0F5 515 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 MMRN2Q9H8L6 949 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 VPS45Q9NRW7 570 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 DDX56Q9NY93 547 aaKnown RBP11.27□□□□□ -0.6
LINC00342-202ENST00000448494 C9orf78Q9NZ63 289 aaPredicted RBP11.27□□□□□ -0.6
LINC00342-202ENST00000448494 ANKFY1Q9P2R3 1169 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 DBNLQ9UJU6 430 aaKnown RBP11.27□□□□□ -0.6
LINC00342-202ENST00000448494 APOBEC2Q9Y235 224 aaKnown RBP11.27□□□□□ -0.6
LINC00342-202ENST00000448494 EDC4Q6P2E9 1401 aaKnown RBP11.27□□□□□ -0.6
LINC00342-202ENST00000448494 PTPRUQ92729 1446 aa11.27□□□□□ -0.6
LINC00342-202ENST00000448494 ADAMTS13Q76LX8 1427 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 GOLGA8QA0A0J9YX86 632 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 GOLGA8OA6NCC3 632 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 ZSCAN5BA6NJL1 495 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 GOLGA8NF8WBI6 632 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 GOLGA8RI6L899 631 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 C6orf222P0C671 652 aaPredicted RBP11.27□□□□□ -0.61
LINC00342-202ENST00000448494 FAM58BPP0C7Q3 252 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 PCP11498 1178 aaKnown RBP11.27□□□□□ -0.61
LINC00342-202ENST00000448494 ATICP31939 592 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 MYBPC1Q00872 1141 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 NR1H3Q13133 447 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 TNIP1Q15025 636 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 EFTUD2Q15029 972 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00342-202ENST00000448494 MOGQ16653 247 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 TJAP1Q5JTD0 557 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 NDUFAF5Q5TEU4 345 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 LPCAT4Q643R3 524 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 ULK2Q8IYT8 1036 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 CADM3Q8N126 398 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 DENND1AQ8TEH3 1009 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 RPGRQ92834 1020 aaKnown RBP11.27□□□□□ -0.61
LINC00342-202ENST00000448494 P2RX5Q93086 422 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 PGBD4Q96DM1 585 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 MTBPQ96DY7 904 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 FAR2Q96K12 515 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 KLHL25Q9H0H3 589 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 CDH19Q9H159 772 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 RSPH9Q9H1X1 276 aaPredicted RBP11.27□□□□□ -0.61
LINC00342-202ENST00000448494 SLCO1B3Q9NPD5 702 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 TMOD2Q9NZR1 351 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 PCSK1NQ9UHG2 260 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 ATPIF1Q9UII2 106 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 NOSIPQ9Y314 301 aaKnown RBP11.27□□□□□ -0.61
LINC00342-202ENST00000448494 MYO5BQ9ULV0 1848 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 METP08581 1390 aa11.27□□□□□ -0.61
LINC00342-202ENST00000448494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.26□□□□□ -0.61
LINC00342-202ENST00000448494 PRPF4O43172 522 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00342-202ENST00000448494 CAMTA2O94983 1202 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 ALX3O95076 343 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 FGGP02679 453 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 C8BP07358 591 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 ALOX5P09917 674 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 PEX2P28328 305 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 CHKAP35790 457 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 RPL21P46778 160 aaKnown RBP11.26□□□□□ -0.61
LINC00342-202ENST00000448494 DLG4P78352 724 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 PSMD6Q15008 389 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 GRIK5Q16478 980 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 CYP2A13Q16696 494 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 TRIM16LQ309B1 348 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 OGFOD2Q6N063 350 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 APOA5Q6Q788 366 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 OTOAQ7RTW8 1153 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 TRUB1Q8WWH5 349 aaKnown RBP11.26□□□□□ -0.61
LINC00342-202ENST00000448494 JADE3Q92613 823 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 HPS1Q92902 700 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 ART4Q93070 314 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 ZFYVE28Q9HCC9 887 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 XAB2Q9HCS7 855 aaKnown RBP11.26□□□□□ -0.61
LINC00342-202ENST00000448494 GPR108Q9NPR9 543 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 C12orf4Q9NQ89 552 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 POU2F3Q9UKI9 436 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 ZBTB21Q9ULJ3 1066 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 PLA2G4CQ9UP65 541 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 MAST3O60307 1309 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 PCDH11YQ9BZA8 1340 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 RGPD1P0DJD0 1748 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 ZMYM2Q9UBW7 1377 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 PI4KAP2A4QPH2 592 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 SNTNA6NMZ2 147 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 DNAJA2O60884 412 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 RHOBTB3O94955 611 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 POLR2CP19387 275 aaPredicted RBP11.26□□□□□ -0.61
LINC00342-202ENST00000448494 PRKCIP41743 596 aa11.26□□□□□ -0.61
LINC00342-202ENST00000448494 CLK3P49761 638 aaKnown RBP11.26□□□□□ -0.61
LINC00342-202ENST00000448494 TFAP4Q01664 338 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms