RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 NRDCO43847 1150 aa22.5■■□□□ 1.19
VPS13B-204ENST00000441350 CYP11B1P15538 503 aa22.5■■□□□ 1.19
VPS13B-204ENST00000441350 EIF4A3P38919 411 aaKnown RBP22.5■■□□□ 1.19
VPS13B-204ENST00000441350 NDST1P52848 882 aa22.5■■□□□ 1.19
VPS13B-204ENST00000441350 C9orf50Q5SZB4 431 aa22.5■■□□□ 1.19
VPS13B-204ENST00000441350 ZNF571Q7Z3V5 609 aaPredicted RBP22.5■■□□□ 1.19
VPS13B-204ENST00000441350 UNC93AQ86WB7 457 aa22.5■■□□□ 1.19
VPS13B-204ENST00000441350 TRIM44Q96DX7 344 aaPredicted RBP22.5■■□□□ 1.19
VPS13B-204ENST00000441350 TWNKQ96RR1 684 aa22.5■■□□□ 1.19
VPS13B-204ENST00000441350 RAD9AQ99638 391 aa22.5■■□□□ 1.19
VPS13B-204ENST00000441350 ELOVL4Q9GZR5 314 aa22.5■■□□□ 1.19
VPS13B-204ENST00000441350 NHEJ1Q9H9Q4 299 aaPredicted RBP22.5■■□□□ 1.19
VPS13B-204ENST00000441350 NOCTQ9UK39 431 aaKnown RBP22.5■■□□□ 1.19
VPS13B-204ENST00000441350 TSC2P49815 1807 aa22.5■■□□□ 1.19
VPS13B-204ENST00000441350 TADA2AO75478 443 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 CYP11A1P05108 521 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 ODC1P11926 461 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 PBX3P40426 434 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 ALDH7A1P49419 539 aaKnown RBP22.49■■□□□ 1.19
VPS13B-204ENST00000441350 ASTE1Q2TB18 679 aaPredicted RBP22.49■■□□□ 1.19
VPS13B-204ENST00000441350 ZNF394Q53GI3 561 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 TDRD12Q587J7 1177 aaKnown RBP22.49■■□□□ 1.19
VPS13B-204ENST00000441350 RAD9BQ6WBX8 426 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 NOP9Q86U38 636 aaKnown RBP22.49■■□□□ 1.19
VPS13B-204ENST00000441350 SLC4A11Q8NBS3 891 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 OLIG1Q8TAK6 271 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 SPATA18Q8TC71 538 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 ZBED2Q9BTP6 218 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 ARHGEF37A1IGU5 675 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 ARHGAP6O43182 974 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 TRAPPC3O43617 180 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 PAEPP09466 180 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 TYMPP19971 482 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 GNL1P36915 607 aaPredicted RBP22.49■■□□□ 1.19
VPS13B-204ENST00000441350 OSTM1Q86WC4 334 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 TMEM173Q86WV6 379 aaPredicted RBP22.49■■□□□ 1.19
VPS13B-204ENST00000441350 OR6B3Q8NGW1 331 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 SP7Q8TDD2 431 aaPredicted RBP22.49■■□□□ 1.19
VPS13B-204ENST00000441350 DDX1Q92499 740 aaKnown RBP22.49■■□□□ 1.19
VPS13B-204ENST00000441350 TMEM176AQ96HP8 235 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 NT5C1AQ9BXI3 368 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 DSEQ9UL01 958 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 PCDHB8Q9UN66 801 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 STXBP5LQ9Y2K9 1186 aa22.49■■□□□ 1.19
VPS13B-204ENST00000441350 NT5C1B-RDH14C9J2C7 533 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 EFEMP2O95967 443 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 CALCAP01258 141 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 LAG3P18627 525 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 MTF1Q14872 753 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 SHHQ15465 462 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 KCNT2Q6UVM3 1135 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 CCDC170Q8IYT3 715 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 SLC20A1Q8WUM9 679 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 BCL7CQ8WUZ0 217 aaPredicted RBP22.48■■□□□ 1.19
VPS13B-204ENST00000441350 CCDC42Q96M95 316 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 GDF15Q99988 308 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 SNX25Q9H3E2 840 aa22.48■■□□□ 1.19
VPS13B-204ENST00000441350 TIMM13Q9Y5L4 95 aaPredicted RBP22.48■■□□□ 1.19
VPS13B-204ENST00000441350 CARNS1A5YM72 827 aa22.47■■□□□ 1.19
VPS13B-204ENST00000441350 LINC00271P0C7V0 271 aa22.47■■□□□ 1.19
VPS13B-204ENST00000441350 CHRNB2P17787 502 aa22.47■■□□□ 1.19
VPS13B-204ENST00000441350 LMO2P25791 158 aa22.47■■□□□ 1.19
VPS13B-204ENST00000441350 ANXA13P27216 316 aa22.47■■□□□ 1.19
VPS13B-204ENST00000441350 LHX1P48742 406 aa22.47■■□□□ 1.19
VPS13B-204ENST00000441350 PDE6CP51160 858 aa22.47■■□□□ 1.19
VPS13B-204ENST00000441350 ZNF558Q96NG5 402 aa22.47■■□□□ 1.19
VPS13B-204ENST00000441350 AGPAT1Q99943 283 aa22.47■■□□□ 1.19
VPS13B-204ENST00000441350 GPR62Q9BZJ7 368 aa22.47■■□□□ 1.19
VPS13B-204ENST00000441350 EPN1Q9Y6I3 576 aaPredicted RBP22.47■■□□□ 1.19
VPS13B-204ENST00000441350 KIAA1671Q9BY89 1806 aa22.47■■□□□ 1.19
VPS13B-204ENST00000441350 GNA15P30679 374 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 ORC1Q13415 861 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 SPOUT1Q5T280 376 aaKnown RBP22.46■■□□□ 1.19
VPS13B-204ENST00000441350 FUT10Q6P4F1 479 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 ZNF677Q86XU0 584 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 CRYBG2Q8N1P7 616 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 FIBCD1Q8N539 461 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 COLGALT1Q8NBJ5 622 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 IGSF21Q96ID5 467 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 RNPC3Q96LT9 517 aaKnown RBP22.46■■□□□ 1.19
VPS13B-204ENST00000441350 ZSWIM1Q9BR11 485 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 SF3B1O75533 1304 aaKnown RBP eCLIP22.46■■□□□ 1.199e-6■■■■■ 68.9
VPS13B-204ENST00000441350 A8MXQ7 604 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 SYN3O14994 580 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 HCRTO43612 131 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 TLL1O43897 1013 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 KIF11P52732 1056 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 CDR2Q01850 454 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 ELAVL2Q12926 359 aaKnown RBP22.46■■□□□ 1.19
VPS13B-204ENST00000441350 METTL23Q86XA0 190 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 SLC39A11Q8N1S5 342 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 SLC30A5Q8TAD4 765 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 ZNF606Q8WXB4 792 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 TFAP2BQ92481 460 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 CLP1Q92989 425 aaKnown RBP22.46■■□□□ 1.19
VPS13B-204ENST00000441350 KIAA1257Q9ULG3 409 aa22.46■■□□□ 1.19
VPS13B-204ENST00000441350 VWA8A3KMH1 1905 aa22.45■■□□□ 1.18
VPS13B-204ENST00000441350 H0YGN5 161 aa22.45■■□□□ 1.18
VPS13B-204ENST00000441350 NDUFA10O95299 355 aa22.45■■□□□ 1.18
VPS13B-204ENST00000441350 PDGFRBP09619 1106 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms