RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 FGFR1OP2Q9NVK5 253 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 PSD3Q9NYI0 1048 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 ROBO3Q96MS0 1386 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 FAM86B1E9PN63 330 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 ALDH2P05091 517 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 FAM86B2P0C5J1 330 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 PON1P27169 355 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 MMTAG2Q9BU76 263 aaKnown RBP17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 DRC3Q9H069 523 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 Q9H521 79 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 NAGPAQ9UK23 515 aa17.61■□□□□ 0.41
PCDHA13-202ENST00000409494 RSPH10B2B2RC85 870 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 GOLGA8MH3BSY2 632 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 CYTH3O43739 400 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 RSPH10BP0C881 870 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 STIP1P31948 543 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 ARSEP51690 589 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 NT5DC1Q5TFE4 455 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 NUGGCQ68CJ6 796 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 TRMT10CQ7L0Y3 403 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 SRLQ86TD4 932 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 SPDYE1Q8NFV5 336 aaPredicted RBP17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 CALML6Q8TD86 181 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 MRPS31Q92665 395 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 ELAC2Q9BQ52 826 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 ZNF212Q9UDV6 495 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 PRG3Q9Y2Y8 225 aaPredicted RBP17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 PCDHB12Q9Y5F1 795 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 CYB561D2O14569 222 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 IRF6O14896 467 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 PSTPIP1O43586 416 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 SP3Q02447 781 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 HIF1AQ16665 826 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 CELF3Q5SZQ8 465 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 CYP4A22Q5TCH4 519 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 ICE2Q659A1 982 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 TRIM67Q6ZTA4 783 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 MSL3Q8N5Y2 521 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 LRGUKQ96M69 825 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 CYTH2Q99418 400 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 APBA2Q99767 749 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 STK25O00506 426 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 KIF3CO14782 793 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 PDK2Q15119 407 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 MTMR9Q96QG7 549 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 DNAJC7Q99615 494 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 TXLNGQ9NUQ3 528 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 FAM49BQ9NUQ9 324 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 SHPRHQ149N8 1683 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 TXNDC9O14530 226 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 ZBTB48P10074 688 aaPredicted RBP17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 SERPINB9P50453 376 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 COPS2P61201 443 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 SKIV2LQ15477 1246 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 FBXO47Q5MNV8 452 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 POTEAQ6S8J7 498 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 NLRP14Q86W24 1093 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 SLC30A5Q8TAD4 765 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 RMDN1Q96DB5 314 aa17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 FNDC3AQ9Y2H6 1198 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-202ENST00000409494 E5RI56 91 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 RPSAP08865 295 aaKnown RBP17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 GCKP35557 465 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 PDIA2Q13087 525 aaKnown RBP17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 PTF1AQ7RTS3 328 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 ZDHHC17Q8IUH5 632 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 KCNMB3Q9NPA1 279 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 RASA4BC9J798 803 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 RASA4O43374 803 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 LY6KQ17RY6 165 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 CFAP61Q8NHU2 1237 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 TSPAN17Q96FV3 270 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 CBWD1Q9BRT8 395 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 KIFC3Q9BVG8 833 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 DFFAO00273 331 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 TMCC1O94876 653 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 SESN3P58005 492 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 RTP1P59025 263 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 ILF2Q12905 390 aaKnown RBP17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 PLD1Q13393 1074 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 BRSK2Q8IWQ3 736 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 TRPC7Q9HCX4 862 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 ALG6Q9Y672 507 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 CHD2O14647 1828 aaKnown RBP17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 ZNF197O14709 1029 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 AP1G2O75843 785 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 HSPA4LO95757 839 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 GCNT1Q02742 428 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 DCAF6Q58WW2 860 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 CDKAL1Q5VV42 579 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 FOXR2Q6PJQ5 311 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 ITIH5Q86UX2 942 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 MRGBPQ9NV56 204 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 SETD4Q9NVD3 440 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 SUN2Q9UH99 717 aa17.59■□□□□ 0.41
PCDHA13-202ENST00000409494 SLIT2O94813 1529 aa17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 UMODL1Q5DID0 1318 aa17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 A0A0A6YYK5 440 aaPredicted RBP17.58■□□□□ 0.41
PCDHA13-202ENST00000409494 PSMD6Q15008 389 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms