RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 RPA3P35244 121 aaPredicted RBP13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 SLC1A1P43005 524 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 COPS2P61201 443 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 C3orf62Q6ZUJ4 267 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 TMEM35BQ8NCS4 154 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 FAM81BQ96LP2 452 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 POLIQ9UNA4 740 aa13.37□□□□□ -0.27
PPP4R1-202ENST00000400555 GRIN3BO60391 1043 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 CBX6O95503 412 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 GLRA2P23416 452 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 FOXN2P32314 431 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 PEX19P40855 299 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 GMPSP49915 693 aaPredicted RBP13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 SP2Q02086 613 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 GCNT1Q02742 428 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 TFDP1Q14186 410 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 ZACNQ401N2 412 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 EAPPQ56P03 285 aaPredicted RBP13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 MDH1BQ5I0G3 518 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 ANGEL2Q5VTE6 544 aaKnown RBP13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 LVRNQ6Q4G3 990 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 CENPUQ71F23 418 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 ACTL9Q8TC94 416 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 LRRC37BQ96QE4 947 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 UBN1Q9NPG3 1134 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 IP6K2Q9UHH9 426 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 SCINQ9Y6U3 715 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 CDK5RAP2Q96SN8 1893 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 NRAPQ86VF7 1730 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 PAEPP09466 180 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 FDX1P10109 184 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 UNGP13051 313 aaPredicted RBP13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 RGS7P49802 495 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 NOMO3P69849 1222 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 SPARCL1Q14515 664 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 STXBP2Q15833 593 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 CCDC6Q16204 474 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 EMC10Q5UCC4 262 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 ZNF280CQ8ND82 737 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 ARFGEF1Q9Y6D6 1849 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 SYNJ2BP-COX16A0A087WUM0 186 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 CCDC195A0A1B0GUA6 201 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 C5orf60A6NFR6 353 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 VNN1O95497 513 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 KITP10721 976 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 FKBP1AP62942 108 aaKnown RBP13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 PTK6Q13882 451 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 CCNG2Q16589 344 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 DARS2Q6PI48 645 aaKnown RBP13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 ENOSF1Q7L5Y1 443 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 TAS1R3Q7RTX0 852 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 FAM228AQ86W67 206 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 CISHQ9NSE2 258 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 COX16Q9P0S2 106 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 PHTF1Q9UMS5 762 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 MAD1L1Q9Y6D9 718 aa13.36□□□□□ -0.27
PPP4R1-202ENST00000400555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 CFAP69A5D8W1 941 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 MYBL1P10243 752 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 KRT3P12035 628 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 ELF1P32519 619 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 MSH2P43246 934 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 BACE1P56817 501 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 NCALDP61601 193 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 OTUD4Q01804 1114 aaKnown RBP13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 STAT4Q14765 748 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 TMEM132BQ14DG7 1078 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 HIF1AQ16665 826 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 PPP6R3Q5H9R7 873 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 PIGWQ7Z7B1 504 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 CENPTQ96BT3 561 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 KIAA1683Q9H0B3 1180 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 NGRNQ9NPE2 291 aaKnown RBP13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 PGK2P07205 417 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 RFC1P35251 1148 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 PCK1P35558 622 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 STAT5BP51692 787 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 LY6KQ17RY6 165 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 C12orf56Q8IXR9 622 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 BBOF1Q8ND07 529 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 C7orf43Q8WVR3 580 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 ACAD9Q9H845 621 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 SCN9AQ15858 1988 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 ONECUT3O60422 494 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 CTCFP49711 727 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 ITIH4Q14624 930 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 ZNF568Q3ZCX4 644 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 CKAP2Q8WWK9 683 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 RBM41Q96IZ5 413 aaKnown RBP13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 HEXIM2Q96MH2 286 aaKnown RBP13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 TEX13BQ9BXU2 312 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 SLC13A1Q9BZW2 595 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 SLC24A3Q9HC58 644 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 NRBP2Q9NSY0 501 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 GPATCH2LQ9NWQ4 482 aa13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 MARCOQ9UEW3 520 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-202ENST00000400555 GARTP22102 1010 aa13.34□□□□□ -0.27
PPP4R1-202ENST00000400555 CPA2P48052 419 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms