RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 HRO43593 1189 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 PAPSS2O95340 614 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-202ENST00000374426 PRAMEF12O95522 483 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 RETP07949 1114 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 NFICP08651 508 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 GABRR2P28476 465 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 FNTBP49356 437 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 CDR1P51861 262 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 SRSF5Q13243 272 aaKnown RBP14.95□□□□□ -0.02
CXCL12-202ENST00000374426 LRRC32Q14392 662 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 GPR158Q5T848 1215 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 ERICH6BQ5W0A0 696 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 C9orf57Q5W0N0 161 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 ARMCX5Q6P1M9 558 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 RALGPS2Q86X27 583 aaPredicted RBP14.95□□□□□ -0.02
CXCL12-202ENST00000374426 CD302Q8IX05 232 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 MYCT1Q8N699 235 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 TTC8Q8TAM2 541 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 FAM212AQ96EL1 285 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 AK8Q96MA6 479 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 CNTNAP3BQ96NU0 1288 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 FIZ1Q96SL8 496 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 LPIN3Q9BQK8 851 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 RTKNQ9BST9 563 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 MSTO1Q9BUK6 570 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 CNTNAP3Q9BZ76 1288 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 GTSE1Q9NYZ3 720 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 HSFX1Q9UBD0 423 aa14.95□□□□□ -0.02
CXCL12-202ENST00000374426 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.95□□□□□ -0.02
CXCL12-202ENST00000374426 ANO9A1A5B4 782 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 PIRO00625 290 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 DPYSL4O14531 572 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 FAM13AO94988 1023 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 FGF19O95750 216 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 CYP11A1P05108 521 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 ATF6P18850 670 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 SCP2P22307 547 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 HOXC13P31276 330 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 SIM2Q14190 667 aaPredicted RBP14.94□□□□□ -0.02
CXCL12-202ENST00000374426 DHX8Q14562 1220 aaKnown RBP14.94□□□□□ -0.02
CXCL12-202ENST00000374426 SLC39A12Q504Y0 691 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 ARHGAP29Q52LW3 1261 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 ITIH5Q86UX2 942 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 IL21Q9HBE4 155 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 PARVGQ9HBI0 331 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 BLOC1S4Q9NUP1 217 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 OBP2AQ9NY56 170 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 TSC2P49815 1807 aa14.94□□□□□ -0.02
CXCL12-202ENST00000374426 SCN1AP35498 2009 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 CEP295Q9C0D2 2601 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 SLC26A4O43511 780 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 TRAK2O60296 914 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 LRP3O75074 770 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 PAX3P23760 479 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 WEE1P30291 646 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 CYP4F8P98187 520 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 TNK2Q07912 1038 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 CCINQ13939 588 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 MCM6Q14566 821 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 TMEM132DQ14C87 1099 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 PON2Q15165 354 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 ARHGAP15Q53QZ3 475 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 DGKKQ5KSL6 1271 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 HEATR6Q6AI08 1181 aaKnown RBP14.93□□□□□ -0.02
CXCL12-202ENST00000374426 LONP2Q86WA8 852 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 SEPT5Q99719 369 aaPredicted RBP14.93□□□□□ -0.02
CXCL12-202ENST00000374426 ZCWPW1Q9H0M4 648 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 TASP1Q9H6P5 420 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 SEMA4GQ9NTN9 838 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 DERAQ9Y315 318 aa14.93□□□□□ -0.02
CXCL12-202ENST00000374426 NUP210Q8TEM1 1887 aaPredicted RBP14.93□□□□□ -0.02
CXCL12-202ENST00000374426 TISP43B9A030 160 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 ANKRD63C9JTQ0 380 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 H3BQV1 296 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 PLCG1P19174 1290 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 GJB2P29033 226 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 NMT1P30419 496 aaKnown RBP14.92□□□□□ -0.02
CXCL12-202ENST00000374426 CNR2P34972 360 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 UBA7P41226 1012 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 TUFMP49411 452 aaKnown RBP14.92□□□□□ -0.02
CXCL12-202ENST00000374426 ACOT2P49753 483 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 GTF2BQ00403 316 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 GRIN1Q05586 938 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 MGAT5BQ3V5L5 792 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 C8orf34Q49A92 452 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 ZC2HC1CQ53FD0 456 aaPredicted RBP14.92□□□□□ -0.02
CXCL12-202ENST00000374426 LRRTM3Q86VH5 581 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 FAM200AQ8TCP9 573 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 NETO1Q8TDF5 533 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 BPIFB1Q8TDL5 484 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 CALML4Q96GE6 196 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 SLC46A2Q9BY10 475 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 SMG9Q9H0W8 520 aaKnown RBP14.92□□□□□ -0.02
CXCL12-202ENST00000374426 ASB7Q9H672 318 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 DSEQ9UL01 958 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 C2CD2Q9Y426 696 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 ANK1P16157 1881 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 LAMA1P25391 3075 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 USP24Q9UPU5 2620 aa14.92□□□□□ -0.02
CXCL12-202ENST00000374426 ZFHX4Q86UP3 3567 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms