RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 MYBPC1Q00872 1141 aa10.06□□□□□ -0.8
SF3A3-201ENST00000373019 FAM91A1Q658Y4 838 aa10.06□□□□□ -0.8
SF3A3-201ENST00000373019 CASP10Q92851 521 aa10.06□□□□□ -0.8
SF3A3-201ENST00000373019 DNAJC19Q96DA6 116 aa10.06□□□□□ -0.8
SF3A3-201ENST00000373019 ANKRD2Q9GZV1 360 aa10.06□□□□□ -0.8
SF3A3-201ENST00000373019 PLGRKTQ9HBL7 147 aa10.06□□□□□ -0.8
SF3A3-201ENST00000373019 SLC38A7Q9NVC3 462 aa10.06□□□□□ -0.8
SF3A3-201ENST00000373019 UVRAGQ9P2Y5 699 aa10.06□□□□□ -0.8
SF3A3-201ENST00000373019 CCPG1Q9ULG6 757 aa10.06□□□□□ -0.8
SF3A3-201ENST00000373019 ARHGAP10A1A4S6 786 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 IPO5O00410 1097 aaKnown RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 RPS6KA4O75676 772 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 CAMTA2O94983 1202 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 TMED10P49755 219 aaKnown RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 BCAP31P51572 246 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 NEK2P51955 445 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 NOP14P78316 857 aaKnown RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 C16orf72Q14CZ0 275 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 USP41Q3LFD5 358 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 CCDC153Q494R4 210 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 HSF5Q4G112 596 aaPredicted RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 SNRNP48Q6IEG0 339 aaKnown RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 CCDC62Q6P9F0 684 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 AAGABQ6PD74 315 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 POTEHQ6S545 545 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 SLC13A5Q86YT5 568 aaPredicted RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 LZTR1Q8N653 840 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 SDR42E1Q8WUS8 393 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 ZFRQ96KR1 1074 aaKnown RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 MAK16Q9BXY0 300 aaKnown RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 MRPS26Q9BYN8 205 aaKnown RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 BHMT2Q9H2M3 363 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 C12orf65Q9H3J6 166 aaKnown RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 SPON1Q9HCB6 807 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 PLK2Q9NYY3 685 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 SMG5Q9UPR3 1016 aaKnown RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 CLEC11AQ9Y240 323 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 PCDHA2Q9Y5H9 948 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 GPC6Q9Y625 555 aaPredicted RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 SCN11AQ9UI33 1791 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 A0A088AWK7 358 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 FCHO1O14526 889 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 TXNDC9O14530 226 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 DNAJA2O60884 412 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 GGPS1O95749 300 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 RBP3P10745 1247 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 ADRA1DP25100 572 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 PHKA2P46019 1235 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 CREB5Q02930 508 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 METTL24Q5JXM2 366 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 VPS36Q86VN1 386 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 CPNE8Q86YQ8 564 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 MIGA1Q8NAN2 632 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 ITPKCQ96DU7 683 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 MTBPQ96DY7 904 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 BTBD9Q96Q07 612 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 GCNAQ96QF7 691 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 NUDT12Q9BQG2 462 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 ADAM33Q9BZ11 813 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 GIT1Q9Y2X7 761 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 WDR91A4D1P6 747 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 XPOTO43592 962 aaKnown RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 ADRA2BP18089 450 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 PLCB3Q01970 1234 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 COASYQ13057 564 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 ITPK1Q13572 414 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 EPHA7Q15375 998 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 DCLRE1AQ6PJP8 1040 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 DCDC5Q6ZRR9 648 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 ALYREFQ86V81 257 aaKnown RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 CD101Q93033 1021 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 SNF8Q96H20 258 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 OXNAD1Q96HP4 312 aaPredicted RBP10.05□□□□□ -0.8
SF3A3-201ENST00000373019 RBM15Q96T37 977 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■■□□□ 11.9
SF3A3-201ENST00000373019 HDAC9Q9UKV0 1011 aa10.05□□□□□ -0.8
SF3A3-201ENST00000373019 CYP2D7A0A087X1C5 515 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 ADCY6O43306 1168 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 C6orf222P0C671 652 aaPredicted RBP10.04□□□□□ -0.8
SF3A3-201ENST00000373019 PMLP29590 882 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 ARL4CP56559 192 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 MTMR2Q13614 643 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 RASA2Q15283 850 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 TRIP13Q15645 432 aaPredicted RBP10.04□□□□□ -0.8
SF3A3-201ENST00000373019 METTL21CQ5VZV1 264 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 KYAT3Q6YP21 454 aaKnown RBP10.04□□□□□ -0.8
SF3A3-201ENST00000373019 DGKHQ86XP1 1220 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 RELL1Q8IUW5 271 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 OGFOD1Q8N543 542 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 LINC00116Q8NCU8 138 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 SLC16A10Q8TF71 515 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 STARD8Q92502 1023 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 CALML4Q96GE6 196 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 TRIM55Q9BYV6 548 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 SH3GLB2Q9NR46 395 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 ATAD3AQ9NVI7 634 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 RRN3Q9NYV6 651 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 ZBTB1Q9Y2K1 713 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 MIF4GDA9UHW6 222 aaKnown RBP10.04□□□□□ -0.8
SF3A3-201ENST00000373019 ITM2AO43736 263 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 CCNT1O60563 726 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms