RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 UBR2Q8IWV8 1755 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 F8W031 263 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 K7ESF4 209 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 P4HA2O15460 535 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 TADA3O75528 432 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 IL33O95760 270 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 HRGP04196 525 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 CAPNS1P04632 268 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 CLTBP09497 229 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 FAM87AP0C7U9 286 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 THEGLP0DJG4 465 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 GRIK1P39086 918 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 TMPRSS15P98073 1019 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 SPARCL1Q14515 664 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 NKG7Q16617 165 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 CPSF6Q16630 551 aaKnown RBP eCLIP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 CYP27C1Q4G0S4 372 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 FILIP1LQ4L180 1135 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 AMOTQ4VCS5 1084 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 ODF2Q5BJF6 829 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 GPATCH4Q5T3I0 446 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 FBXW10Q5XX13 1052 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 BTNL9Q6UXG8 535 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 TTLL7Q6ZT98 887 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 EP400NLQ6ZTU2 488 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 TAX1BP1Q86VP1 789 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 TMEM105Q8N8V8 129 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 C19orf47Q8N9M1 422 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 RBBP8NLQ8NC74 664 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 CYB5D2Q8WUJ1 264 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 ZNF75CPQ92670 426 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 USP6NLQ92738 828 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 USP7Q93009 1102 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 ATP2A3Q93084 1043 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 KISS1RQ969F8 398 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 ASIC4Q96FT7 647 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 FUBP3Q96I24 572 aaKnown RBP eCLIP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 RMDN2Q96LZ7 410 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 NT5C1BQ96P26 610 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 EYA3Q99504 573 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 MIPEPQ99797 713 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 TACO1Q9BSH4 297 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 METTL22Q9BUU2 404 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 TMEM39BQ9GZU3 492 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 EPN3Q9H201 632 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 TNKS2Q9H2K2 1166 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 IFT22Q9H7X7 185 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 BRD9Q9H8M2 597 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 RSAD1Q9HA92 442 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 STARD7Q9NQZ5 370 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 GPR34Q9UPC5 381 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 ITM2BQ9Y287 266 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 OAS3Q9Y6K5 1087 aaKnown RBP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 UBR5O95071 2799 aaPredicted RBP3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 ZNF804BA4D1E1 1349 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 FBN3Q75N90 2809 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 WDFY3Q8IZQ1 3526 aa3.86□□□□□ -1.79
ECHDC1-205ENST00000368295 LRRC10BA6NIK2 292 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 CCP110O43303 1012 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ZBED4O75132 1171 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 MTRF1O75570 445 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 APBB3O95704 486 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ZBED1O96006 694 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 PRB1P04280 392 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 APOA4P06727 396 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 BTF3P20290 206 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ADCYAP1R1P41586 468 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 CD86P42081 329 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 USP14P54578 494 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 KRT85P78386 507 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ZXDAP98168 799 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 FAPQ12884 760 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 CDC16Q13042 620 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 IFIT5Q13325 482 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 PPIL2Q13356 520 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ANKRD1Q15327 319 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ABCB5Q2M3G0 1257 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 EPHA10Q5JZY3 1008 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 DGKKQ5KSL6 1271 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 CCDC149Q6ZUS6 474 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 PDZD4Q76G19 769 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 OTOP2Q7RTS6 562 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 MTERF4Q7Z6M4 381 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ERO1BQ86YB8 467 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 EPHX4Q8IUS5 362 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ADHFE1Q8IWW8 467 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ANKRD49Q8WVL7 239 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 C17orf50Q8WW18 174 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 KCTD13Q8WZ19 329 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ERCC4Q92889 916 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 GATA6Q92908 595 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 RBM18Q96H35 190 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 TEPSINQ96N21 525 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 CLUHP3Q96NS8 147 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 OSBPL1AQ9BXW6 950 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 UBN1Q9NPG3 1134 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 TRAF3IP3Q9Y228 551 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 CEP83Q9Y592 693 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 EPN1Q9Y6I3 576 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ITPR1Q14643 2758 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms