RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 OAZ3Q9UMX2 235 aa6.83□□□□□ -1.32
RNU4-39P-201ENST00000362455 ABHD14A-ACY1A0A1B0GW23 586 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 TCRBV7S2A1N4TA0A589 114 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 KIAA0391O15091 583 aaKnown RBP6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 HOXA3O43365 443 aaPredicted RBP6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 MATN4O95460 622 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 MTHFD1P11586 935 aaKnown RBP6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 HDCP19113 662 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 KCNC1P48547 511 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 SUMO3P55854 103 aaPredicted RBP6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 SOX8P57073 446 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 EXOSC9Q06265 439 aaKnown RBP6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 ZNF543Q08ER8 600 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 CCDC93Q567U6 631 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 ANKS6Q68DC2 871 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 CIAPIN1Q6FI81 312 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 KRT27Q7Z3Y8 459 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 DPP9Q86TI2 863 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 GPR135Q8IZ08 494 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 OR2C3Q8N628 320 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 ENAHQ8N8S7 591 aaPredicted RBP6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 IL17RDQ8NFM7 739 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 ARL8AQ96BM9 186 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 P2RX7Q99572 595 aaKnown RBP6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 PTPRHQ9HD43 1115 aa6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 RRBP1Q9P2E9 1410 aaKnown RBP6.82□□□□□ -1.32
RNU4-39P-201ENST00000362455 FOXN3O00409 490 aaPredicted RBP6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 SNRPA1P09661 255 aaKnown RBP6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 EN2P19622 333 aaPredicted RBP6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 TNFSF4P23510 183 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 PHKA1P46020 1223 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 STK3Q13188 491 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 GRAMD1BQ3KR37 738 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 FAM83BQ5T0W9 1011 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 NT5DC1Q5TFE4 455 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 EMC10Q5UCC4 262 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 ZNF529Q6P280 563 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 UBE3BQ7Z3V4 1068 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 FRMD5Q7Z6J6 570 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 SESTD1Q86VW0 696 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 DEPTORQ8TB45 409 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 KBTBD7Q8WVZ9 684 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 NDC1Q9BTX1 674 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 PACSIN1Q9BY11 444 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 TRIM54Q9BYV2 358 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 STK32BQ9NY57 414 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 ZDHHC8Q9ULC8 765 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 CDC42BPGQ6DT37 1551 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 SPHKAPQ2M3C7 1700 aa6.81□□□□□ -1.32
RNU4-39P-201ENST00000362455 PNPLA7Q6ZV29 1317 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 POM121BA6NF01 834 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 PRSS29PA6NIE9 313 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 B5MCH6 92 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 PJA2O43164 708 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 NCK2O43639 380 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 CDC14BO60729 498 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 C8AP07357 584 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 GNAI3P08754 354 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 CR2P20023 1033 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 SLC6A4P31645 630 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 STT3AP46977 705 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 ARFIP2P53365 341 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 RAP2BP61225 183 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 GNAI1P63096 354 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 CHAF1AQ13111 956 aaPredicted RBP6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 DHX8Q14562 1220 aaKnown RBP6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 ZNF124Q15973 351 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 FAM111BQ6SJ93 734 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 ARHGEF18Q6ZSZ5 1173 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 PLEKHH3Q7Z736 793 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 XYLT1Q86Y38 959 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 LIX1LQ8IVB5 337 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 LGI4Q8N135 537 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 BORCS6Q96GS4 357 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 SUCLG2Q96I99 432 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 LRRC37BQ96QE4 947 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 LMF1Q96S06 567 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 MPHOSPH9Q99550 1183 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 UNKQ9C0B0 810 aaKnown RBP6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 YTHDC2Q9H6S0 1430 aaKnown RBP6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 PNPLA8Q9NP80 782 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 SBNO1A3KN83 1393 aa6.8□□□□□ -1.32
RNU4-39P-201ENST00000362455 CCDC144AA2RUR9 1427 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 PIK3C2GO75747 1445 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 TNS3Q68CZ2 1445 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 F8W8V4 182 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 SLC43A1O75387 559 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 TSHRP16473 764 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 KCNJ5P48544 419 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 CLRN1P58418 232 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 PPP2CBP62714 309 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 PPP2CAP67775 309 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 NOMO3P69849 1222 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 R3HDM1Q15032 1099 aaKnown RBP6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 FAM209BQ5JX69 171 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 ERAP2Q6P179 960 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 ZNF512Q96ME7 567 aaPredicted RBP6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 PRAM1Q96QH2 718 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 ADAM7Q9H2U9 754 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms