RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 TBC1D17Q9HA65 648 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 CACNG4Q9UBN1 327 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 LRRC10BA6NIK2 292 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 RBAK-RBAKDNI3L0D1 243 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ATP2A1O14983 1001 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 STX10O60499 249 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 TNNT1P13805 278 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 DARSP14868 501 aaKnown RBP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 NT5C2P49902 561 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 USP11P51784 963 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 NTHL1P78549 312 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ITIH3Q06033 890 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 DUSP4Q13115 394 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 MOGSQ13724 837 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 UBAP2Q5T6F2 1119 aaKnown RBP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 DAB2IPQ5VWQ8 1189 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 SLC27A1Q6PCB7 646 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ZNF852Q6ZMS4 543 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 TPGS1Q6ZTW0 290 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 NOP9Q86U38 636 aaKnown RBP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ECHDC2Q86YB7 292 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 SIX6OS1Q8N1H7 587 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 COLGALT1Q8NBJ5 622 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 STKLD1Q8NE28 680 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 SKA1Q96BD8 255 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 SAAL1Q96ER3 474 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 INPP4AQ96PE3 977 aaPredicted RBP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 RTP3Q9BQQ7 232 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 NXF3Q9H4D5 531 aaKnown RBP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 SFXN1Q9H9B4 322 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 PRDM9Q9NQV7 894 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 TBC1D13Q9NVG8 400 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 LCMT1Q9UIC8 334 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 GNEQ9Y223 722 aaKnown RBP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 NUMBLQ9Y6R0 609 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 SPTBN1Q01082 2364 aaKnown RBP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 BIN1O00499 593 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 NRP1O14786 923 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 CLIC2O15247 247 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 PFKFB2O60825 505 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ODC1P11926 461 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 IFNAR1P17181 557 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 HOXB4P17483 251 aaPredicted RBP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 PTPN2P17706 415 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 CCNE1P24864 410 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 CST5P28325 142 aaPredicted RBP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 CREMQ03060 361 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 TROAPQ12815 778 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 TMEM132DQ14C87 1099 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 SLC39A12Q504Y0 691 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 RILPL1Q5EBL4 403 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ANKS3Q6ZW76 656 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 SRGAP1Q7Z6B7 1085 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 TICAM2Q86XR7 235 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ZNF295-AS1Q8N0V1 137 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 CSGALNACT2Q8N6G5 542 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 LEO1Q8WVC0 666 aaPredicted RBP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ANP32BQ92688 251 aaKnown RBP4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ZNF653Q96CK0 615 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 SPACA7Q96KW9 195 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ZNF560Q96MR9 790 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 PI4K2AQ9BTU6 479 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 CBX8Q9HC52 389 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ARHGEF3Q9NR81 526 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 CDH22Q9UJ99 828 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 SALL4Q9UJQ4 1053 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ADAM28Q9UKQ2 775 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 PLA2G4CQ9UP65 541 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 PCDHA2Q9Y5H9 948 aa4.06□□□□□ -1.76
SMC1B-201ENST00000357450 ANKRD11Q6UB99 2663 aaPredicted RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 KDM3AQ9Y4C1 1321 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 HIDE1A8MVS5 230 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 H3BNC9 293 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 H3BQF6 201 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 DAPK3O43293 454 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 HDCP19113 662 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 ABCB4P21439 1286 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 GJC1P36383 396 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 MTIF2P46199 727 aaKnown RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 MCM2P49736 904 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 ERVK-21P61565 698 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 MRPS9P82933 396 aaKnown RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 TNFAIP8L3Q5GJ75 292 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 SDHAF4Q5VUM1 108 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 MTSS1LQ765P7 747 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 CMTR2Q8IYT2 770 aaKnown RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 CCDC26Q8TAB7 109 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 ZNF507Q8TCN5 953 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 HEXIM2Q96MH2 286 aaKnown RBP4.05□□□□□ -1.76
SMC1B-201ENST00000357450 MYOCQ99972 504 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 SPON2Q9BUD6 331 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 TPSD1Q9BZJ3 242 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 FOXQ1Q9C009 403 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 LMAN2LQ9H0V9 348 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 LMAN1LQ9HAT1 526 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 PARVGQ9HBI0 331 aa4.05□□□□□ -1.76
SMC1B-201ENST00000357450 ANAPC4Q9UJX5 808 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms