RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SDHBP21912 280 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 DNAJC3Q13217 504 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 DLG2Q15700 870 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 SBK1Q52WX2 424 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 HDXQ7Z353 690 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 MICALL1Q8N3F8 863 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 USP38Q8NB14 1042 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 CLEC4DQ8WXI8 215 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 BRD8Q9H0E9 1235 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 RC3H2Q9HBD1 1191 aaKnown RBP6.04□□□□□ -1.44
CD47-201ENST00000355354 PCDHA12Q9UN75 941 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 F8VZ95 297 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 CAPN9O14815 690 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 OR52Z1P0C646 297 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 PLA2G4BP0C869 781 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 EIF2AK2P19525 551 aaKnown RBP6.04□□□□□ -1.44
CD47-201ENST00000355354 EDNRBP24530 442 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 CEP85LQ5SZL2 805 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 ZCCHC23Q6ZST2 131 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 POLNQ7Z5Q5 900 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 EBF4Q9BQW3 602 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 HEATR5AQ86XA9 2040 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 ENO4A6NNW6 628 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 LCA5LO95447 670 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 SNAI1O95863 264 aaPredicted RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 ELNP15502 786 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 ATP2A2P16615 1042 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 SMAD3P84022 425 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 CYHR1Q6ZMK1 362 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 FAM43BQ6ZT52 329 aaPredicted RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 CCDC60Q8IWA6 550 aaPredicted RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 PPM1KQ8N3J5 372 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 PSPC1Q8WXF1 523 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 ZNF512Q96ME7 567 aaPredicted RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 PEBP4Q96S96 227 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 NRTNQ99748 197 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 LSM14BQ9BX40 385 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 DHX36Q9H2U1 1008 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 NOC2LQ9Y3T9 749 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 COL7A1Q02388 2944 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 NUP210Q8TEM1 1887 aaPredicted RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 FAM189A1O60320 539 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 VNN1O95497 513 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 TSPY3P0CV98 308 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 TSPY8P0CW00 308 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 CACNA2D1P54289 1103 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 OSTNP61366 133 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 TPH2Q8IWU9 490 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 FAM156AQ8NDB6 213 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 HELQQ8TDG4 1101 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 LPAR1Q92633 364 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 GPATCH3Q96I76 525 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 CEP89Q96ST8 783 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 PCYT2Q99447 389 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 PAAF1Q9BRP4 392 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 STIM2Q9P246 746 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 TMX2Q9Y320 296 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 NAV2Q8IVL1 2488 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 SIGLEC16A6NMB1 481 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 CEP104O60308 925 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 PTMSP20962 102 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 COMTP21964 271 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 HOXC13P31276 330 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 GPX6P59796 221 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 AUHQ13825 339 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 SLC9C1Q4G0N8 1177 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 DCAF8Q5TAQ9 597 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 DCAF15Q66K64 600 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 CES3Q6UWW8 571 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 SLFN11Q7Z7L1 901 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 TCP11Q8WWU5 503 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 TAAR1Q96RJ0 339 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 PDGFCQ9NRA1 345 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 SERPINB13Q9UIV8 391 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 CAPN7Q9Y6W3 813 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 ZHX2Q9Y6X8 837 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 TRPM6Q9BX84 2022 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 CTAGE9A4FU28 777 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 C19orf81C9J6K1 198 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 GOLGA8KD6RF30 607 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 GOLGA8TH3BQL2 631 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 SCAMP3O14828 347 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 KCNJ6P48051 423 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 MXI1P50539 228 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 ALDH5A1P51649 535 aaPredicted RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 ADAM9Q13443 819 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 KHDC1Q4VXA5 237 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 TDRD12Q587J7 1177 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 REXO1Q8N1G1 1221 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 MAPK15Q8TD08 544 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 ZNF473Q8WTR7 871 aaKnown RBP6.03□□□□□ -1.44
CD47-201ENST00000355354 APBA2Q99767 749 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 LATS2Q9NRM7 1088 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 BCCIPQ9P287 314 aaKnown RBP eCLIP6.03□□□□□ -1.44
CD47-201ENST00000355354 WNK1Q9H4A3 2382 aa6.03□□□□□ -1.44
CD47-201ENST00000355354 TMEM110-MUSTN1A8MSY1 372 aa6.02□□□□□ -1.45
CD47-201ENST00000355354 LPXNO60711 386 aa6.02□□□□□ -1.45
CD47-201ENST00000355354 HMGB1P09429 215 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms