RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.78■□□□□ 0.6
APP-202ENST00000348990 MAGEB2O15479 319 aa18.78■□□□□ 0.6
APP-202ENST00000348990 GCAP28676 217 aa18.78■□□□□ 0.6
APP-202ENST00000348990 PHBP35232 272 aa18.78■□□□□ 0.6
APP-202ENST00000348990 GEMIN4P57678 1058 aaKnown RBP18.78■□□□□ 0.6
APP-202ENST00000348990 MFSD7Q6UXD7 560 aa18.78■□□□□ 0.6
APP-202ENST00000348990 USP37Q86T82 979 aa18.78■□□□□ 0.6
APP-202ENST00000348990 GALNT15Q8N3T1 639 aa18.78■□□□□ 0.6
APP-202ENST00000348990 FAM111AQ96PZ2 611 aa18.78■□□□□ 0.6
APP-202ENST00000348990 PPARGC1AQ9UBK2 798 aaKnown RBP18.78■□□□□ 0.6
APP-202ENST00000348990 EXOC7Q9UPT5 735 aa18.78■□□□□ 0.6
APP-202ENST00000348990 LPXNO60711 386 aa18.77■□□□□ 0.6
APP-202ENST00000348990 BRDTQ58F21 947 aaPredicted RBP18.77■□□□□ 0.6
APP-202ENST00000348990 ANKS1BQ7Z6G8 1248 aa18.77■□□□□ 0.6
APP-202ENST00000348990 CTAGE3PQ8IX95 158 aa18.77■□□□□ 0.6
APP-202ENST00000348990 COA1Q9GZY4 146 aa18.77■□□□□ 0.6
APP-202ENST00000348990 SAR1AQ9NR31 198 aa18.77■□□□□ 0.6
APP-202ENST00000348990 MARCOQ9UEW3 520 aaPredicted RBP18.77■□□□□ 0.6
APP-202ENST00000348990 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.77■□□□□ 0.6
APP-202ENST00000348990 CIB2O75838 187 aa18.77■□□□□ 0.6
APP-202ENST00000348990 TJP3O95049 919 aa18.77■□□□□ 0.6
APP-202ENST00000348990 YY1P25490 414 aa18.77■□□□□ 0.6
APP-202ENST00000348990 GAD2Q05329 585 aa18.77■□□□□ 0.6
APP-202ENST00000348990 LAMB3Q13751 1172 aa18.77■□□□□ 0.6
APP-202ENST00000348990 RINLQ6ZS11 566 aa18.77■□□□□ 0.6
APP-202ENST00000348990 SLC25A41Q8N5S1 370 aa18.77■□□□□ 0.6
APP-202ENST00000348990 PHC3Q8NDX5 983 aa18.77■□□□□ 0.6
APP-202ENST00000348990 NRG4Q8WWG1 115 aa18.77■□□□□ 0.6
APP-202ENST00000348990 MKL1Q969V6 931 aa18.77■□□□□ 0.6
APP-202ENST00000348990 A0A1B0GVG6 124 aa18.76■□□□□ 0.59
APP-202ENST00000348990 P4HBP07237 508 aaKnown RBP18.76■□□□□ 0.59
APP-202ENST00000348990 CFHP08603 1231 aa18.76■□□□□ 0.59
APP-202ENST00000348990 MYL2P10916 166 aa18.76■□□□□ 0.59
APP-202ENST00000348990 MYBPC2Q14324 1141 aa18.76■□□□□ 0.59
APP-202ENST00000348990 ARHGAP24Q8N264 748 aa18.76■□□□□ 0.59
APP-202ENST00000348990 RILPQ96NA2 401 aa18.76■□□□□ 0.59
APP-202ENST00000348990 PAFAH2Q99487 392 aa18.76■□□□□ 0.59
APP-202ENST00000348990 MRPL47Q9HD33 250 aaKnown RBP18.76■□□□□ 0.59
APP-202ENST00000348990 NUMBLQ9Y6R0 609 aa18.76■□□□□ 0.59
APP-202ENST00000348990 KLHL33A6NCF5 533 aa18.76■□□□□ 0.59
APP-202ENST00000348990 ABHD2P08910 425 aa18.76■□□□□ 0.59
APP-202ENST00000348990 TCF4P15884 667 aa18.76■□□□□ 0.59
APP-202ENST00000348990 BGNP21810 368 aa18.76■□□□□ 0.59
APP-202ENST00000348990 RANBP1P43487 201 aa18.76■□□□□ 0.59
APP-202ENST00000348990 CPXCR1Q8N123 301 aa18.76■□□□□ 0.59
APP-202ENST00000348990 TRIM11Q96F44 468 aa18.76■□□□□ 0.59
APP-202ENST00000348990 OPHN1O60890 802 aa18.76■□□□□ 0.59
APP-202ENST00000348990 RARRES1P49788 294 aa18.76■□□□□ 0.59
APP-202ENST00000348990 RPS6KA3P51812 740 aa18.76■□□□□ 0.59
APP-202ENST00000348990 CUL3Q13618 768 aa18.76■□□□□ 0.59
APP-202ENST00000348990 DDX1Q92499 740 aaKnown RBP18.76■□□□□ 0.59
APP-202ENST00000348990 THTPAQ9BU02 230 aa18.76■□□□□ 0.59
APP-202ENST00000348990 KMT5AQ9NQR1 393 aa18.76■□□□□ 0.59
APP-202ENST00000348990 TAS2R1Q9NYW7 299 aa18.76■□□□□ 0.59
APP-202ENST00000348990 WDR35Q9P2L0 1181 aa18.76■□□□□ 0.59
APP-202ENST00000348990 ATAD5Q96QE3 1844 aa18.75■□□□□ 0.59
APP-202ENST00000348990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.75■□□□□ 0.59
APP-202ENST00000348990 CCDC195A0A1B0GUA6 201 aa18.75■□□□□ 0.59
APP-202ENST00000348990 MAGEA13PA6NCF6 341 aa18.75■□□□□ 0.59
APP-202ENST00000348990 MYCLP12524 364 aaPredicted RBP18.75■□□□□ 0.59
APP-202ENST00000348990 MUTP22033 750 aa18.75■□□□□ 0.59
APP-202ENST00000348990 BASP1P80723 227 aaKnown RBP18.75■□□□□ 0.59
APP-202ENST00000348990 TRAF1Q13077 416 aa18.75■□□□□ 0.59
APP-202ENST00000348990 IWS1Q96ST2 819 aa18.75■□□□□ 0.59
APP-202ENST00000348990 PCDHB2Q9Y5E7 798 aa18.75■□□□□ 0.59
APP-202ENST00000348990 LIASO43766 372 aa18.75■□□□□ 0.59
APP-202ENST00000348990 HARSP12081 509 aaKnown RBP18.75■□□□□ 0.59
APP-202ENST00000348990 ADRA2BP18089 450 aa18.75■□□□□ 0.59
APP-202ENST00000348990 KLRC2P26717 231 aa18.75■□□□□ 0.59
APP-202ENST00000348990 YWHABP31946 246 aaKnown RBP18.75■□□□□ 0.59
APP-202ENST00000348990 YWHAGP61981 247 aaKnown RBP eCLIP18.75■□□□□ 0.59
APP-202ENST00000348990 RC3H1Q5TC82 1133 aaKnown RBP18.75■□□□□ 0.59
APP-202ENST00000348990 PTPRN2Q92932 1015 aa18.75■□□□□ 0.59
APP-202ENST00000348990 MAST2Q6P0Q8 1798 aa18.75■□□□□ 0.59
APP-202ENST00000348990 ARHGAP42A6NI28 874 aa18.75■□□□□ 0.59
APP-202ENST00000348990 ALCAMQ13740 583 aa18.75■□□□□ 0.59
APP-202ENST00000348990 ZNF394Q53GI3 561 aa18.75■□□□□ 0.59
APP-202ENST00000348990 IZUMO2Q6UXV1 221 aa18.75■□□□□ 0.59
APP-202ENST00000348990 KCTD17Q8N5Z5 321 aa18.75■□□□□ 0.59
APP-202ENST00000348990 ACER1Q8TDN7 264 aa18.75■□□□□ 0.59
APP-202ENST00000348990 RSAD2Q8WXG1 361 aa18.75■□□□□ 0.59
APP-202ENST00000348990 TUBB6Q9BUF5 446 aa18.75■□□□□ 0.59
APP-202ENST00000348990 KCNH7Q9NS40 1196 aa18.75■□□□□ 0.59
APP-202ENST00000348990 FAM237BA0A1B0GVD1 139 aa18.74■□□□□ 0.59
APP-202ENST00000348990 FCHO1O14526 889 aa18.74■□□□□ 0.59
APP-202ENST00000348990 GRIN3BO60391 1043 aa18.74■□□□□ 0.59
APP-202ENST00000348990 HNRNPCL1O60812 293 aaKnown RBP18.74■□□□□ 0.59
APP-202ENST00000348990 AMPD1P23109 780 aa18.74■□□□□ 0.59
APP-202ENST00000348990 QARSP47897 775 aaKnown RBP18.74■□□□□ 0.59
APP-202ENST00000348990 RPL7AP62424 266 aaKnown RBP18.74■□□□□ 0.59
APP-202ENST00000348990 DMP1Q13316 513 aaPredicted RBP18.74■□□□□ 0.59
APP-202ENST00000348990 KLF1Q13351 362 aaPredicted RBP18.74■□□□□ 0.59
APP-202ENST00000348990 SGSM1Q2NKQ1 1148 aa18.74■□□□□ 0.59
APP-202ENST00000348990 NLRX1Q86UT6 975 aa18.74■□□□□ 0.59
APP-202ENST00000348990 HIPK4Q8NE63 616 aa18.74■□□□□ 0.59
APP-202ENST00000348990 EXD1Q8NHP7 514 aa18.74■□□□□ 0.59
APP-202ENST00000348990 CLPTM1LQ96KA5 538 aa18.74■□□□□ 0.59
APP-202ENST00000348990 FOXP3Q9BZS1 431 aa18.74■□□□□ 0.59
APP-202ENST00000348990 CHMP2BQ9UQN3 213 aa18.74■□□□□ 0.59
APP-202ENST00000348990 IVNS1ABPQ9Y6Y0 642 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms