RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 AENQ8WTP8 325 aaKnown RBP13.22□□□□□ -0.29
ZNF548-201ENST00000336128 CELF4Q9BZC1 486 aaKnown RBP13.22□□□□□ -0.29
ZNF548-201ENST00000336128 PLEKHA4Q9H4M7 779 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 GTF2IRD1Q9UHL9 959 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 CASP8AP2Q9UKL3 1982 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 SCN10AQ9Y5Y9 1956 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 ADAMTS4O75173 837 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 GJB6O95452 261 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 AKAP5P24588 427 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 SLC1A1P43005 524 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 RWDD2BP57060 319 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 GUCY2DQ02846 1103 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 PTPN11Q06124 597 aaPredicted RBP13.22□□□□□ -0.29
ZNF548-201ENST00000336128 MYO1EQ12965 1108 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 CASP8Q14790 479 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 ZBTB6Q15916 424 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 GDF6Q6KF10 455 aaPredicted RBP13.22□□□□□ -0.29
ZNF548-201ENST00000336128 ALKAL1Q6UXT8 129 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 FEZF2Q8TBJ5 459 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 C18orf25Q96B23 403 aaPredicted RBP13.22□□□□□ -0.29
ZNF548-201ENST00000336128 TMEM176AQ96HP8 235 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 CAPNS2Q96L46 248 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 SLITRK6Q9H5Y7 841 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 PARVAQ9NVD7 372 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 TRPV2Q9Y5S1 764 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 GOLGA6L10A0A0M3HER8 536 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 ZSCAN5CA6NGD5 496 aaPredicted RBP13.21□□□□□ -0.29
ZNF548-201ENST00000336128 PPEF2O14830 753 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 SART1O43290 800 aaKnown RBP13.21□□□□□ -0.29
ZNF548-201ENST00000336128 PYGMP11217 842 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 CCND3P30281 292 aaPredicted RBP13.21□□□□□ -0.29
ZNF548-201ENST00000336128 SP3Q02447 781 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 INCA1Q0VD86 236 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 FAM47CQ5HY64 1035 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 GLRA4Q5JXX5 417 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 ADAT2Q7Z6V5 191 aaKnown RBP13.21□□□□□ -0.29
ZNF548-201ENST00000336128 FAM228AQ86W67 206 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 LHX5Q9H2C1 402 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 EPB41L5Q9HCM4 733 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 XPNPEP3Q9NQH7 507 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 NR2E1Q9Y466 385 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 CDY2AQ9Y6F7 541 aa13.21□□□□□ -0.29
ZNF548-201ENST00000336128 PDCD11Q14690 1871 aaKnown RBP13.21□□□□□ -0.3
ZNF548-201ENST00000336128 A0A0U1RQG5 324 aaPredicted RBP13.21□□□□□ -0.3
ZNF548-201ENST00000336128 TCRBV5S1A1TA0A578 114 aa13.21□□□□□ -0.3
ZNF548-201ENST00000336128 M0QZ92 97 aa13.21□□□□□ -0.3
ZNF548-201ENST00000336128 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.3
ZNF548-201ENST00000336128 PRKAR2AP13861 404 aaKnown RBP13.21□□□□□ -0.3
ZNF548-201ENST00000336128 ELNP15502 786 aa13.21□□□□□ -0.3
ZNF548-201ENST00000336128 HSPA6P17066 643 aa13.21□□□□□ -0.3
ZNF548-201ENST00000336128 DNAJC24Q6P3W2 148 aa13.21□□□□□ -0.3
ZNF548-201ENST00000336128 ERICH1Q86X53 443 aa13.21□□□□□ -0.3
ZNF548-201ENST00000336128 CASKIN2Q8WXE0 1202 aa13.21□□□□□ -0.3
ZNF548-201ENST00000336128 RNF39Q9H2S5 420 aa13.21□□□□□ -0.3
ZNF548-201ENST00000336128 FAM124BQ9H5Z6 455 aaPredicted RBP13.21□□□□□ -0.3
ZNF548-201ENST00000336128 RNF186Q9NXI6 227 aa13.21□□□□□ -0.3
ZNF548-201ENST00000336128 KLK14Q9P0G3 267 aa13.21□□□□□ -0.3
ZNF548-201ENST00000336128 PARP2Q9UGN5 583 aa13.21□□□□□ -0.3
ZNF548-201ENST00000336128 BARX2Q9UMQ3 279 aaPredicted RBP13.21□□□□□ -0.3
ZNF548-201ENST00000336128 UBQLN1Q9UMX0 589 aaKnown RBP13.21□□□□□ -0.3
ZNF548-201ENST00000336128 ESYT3A0FGR9 886 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 MICAL2O94851 1124 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 VDRP11473 427 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 MAN1A1P33908 653 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 NDST1P52848 882 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 CYP4A22Q5TCH4 519 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 TTC39CQ8N584 583 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 LRRC52Q8N7C0 313 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 WNT8BQ93098 351 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 ERVK-5Q9HDB9 667 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 RNF19AQ9NV58 838 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 CYTH4Q9UIA0 394 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 IPPQ9Y573 584 aa13.2□□□□□ -0.3
ZNF548-201ENST00000336128 TMEM191CA6NGB0 347 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 CARSP49589 748 aaKnown RBP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 EPHB4P54760 987 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 PAK2Q13177 524 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 DEFB115Q30KQ5 88 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 PTPN20Q4JDL3 420 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 XKR4Q5GH76 650 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 SND1Q7KZF4 910 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 RSPH3Q86UC2 560 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 SLC13A5Q86YT5 568 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 REM2Q8IYK8 340 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 SMG8Q8ND04 991 aaKnown RBP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 CCDC26Q8TAB7 109 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 HEXIM2Q96MH2 286 aaKnown RBP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 GDAP1L1Q96MZ0 367 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 IP6K2Q9UHH9 426 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 AMACRQ9UHK6 382 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 TRIP11Q15643 1979 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 SMIM28A0A1B0GU29 152 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 BHMG1C9JSJ3 638 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 M0QYV0 167 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 TOMM70O94826 608 aa13.19□□□□□ -0.3
ZNF548-201ENST00000336128 MYCNP04198 464 aaPredicted RBP13.19□□□□□ -0.3
ZNF548-201ENST00000336128 KCNE1P15382 129 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms