RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 GLYCTKQ8IVS8 523 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 ZMAT2Q96NC0 199 aaKnown RBP11.44□□□□□ -0.58
CASP3-201ENST00000308394 LUC7LQ9NQ29 371 aaKnown RBP11.44□□□□□ -0.58
CASP3-201ENST00000308394 FAM105AQ9NUU6 356 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 SIX4Q9UIU6 781 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 AGAP1Q9UPQ3 857 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 PCDHB4Q9Y5E5 795 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 RCCD1A6NED2 376 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 KIF2AO00139 706 aaPredicted RBP11.44□□□□□ -0.58
CASP3-201ENST00000308394 ATN1P54259 1190 aaPredicted RBP11.44□□□□□ -0.58
CASP3-201ENST00000308394 PDAP1Q13442 181 aaKnown RBP11.44□□□□□ -0.58
CASP3-201ENST00000308394 ALKBH5Q6P6C2 394 aaKnown RBP11.44□□□□□ -0.58
CASP3-201ENST00000308394 TMEM270Q6UE05 265 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 SCARA5Q6ZMJ2 495 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 PLPP6Q8IY26 295 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 SLC20A1Q8WUM9 679 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 LACRTQ9GZZ8 138 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 XYLT2Q9H1B5 865 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 DNAI1Q9UI46 699 aa11.44□□□□□ -0.58
CASP3-201ENST00000308394 CD58P19256 250 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 ARHGAP25P42331 645 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 PDE6CP51160 858 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 LBX1P52954 281 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 ETF1P62495 437 aaKnown RBP11.43□□□□□ -0.58
CASP3-201ENST00000308394 ZNF667Q5HYK9 610 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 FAM26DQ5JW98 314 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 ALKAL1Q6UXT8 129 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 U2AF1L4Q8WU68 220 aaKnown RBP11.43□□□□□ -0.58
CASP3-201ENST00000308394 MPP4Q96JB8 637 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 AGPAT1Q99943 283 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 NIF3L1Q9GZT8 377 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 ERVK-5Q9HDB9 667 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 CNTN3Q9P232 1028 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 NAGPAQ9UK23 515 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 ITGA11Q9UKX5 1188 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 JRKLQ9Y4A0 524 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 DUSP10Q9Y6W6 482 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 FRMPD3Q5JV73 1810 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 MACROD2A1Z1Q3 448 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 DDX3XO00571 662 aaKnown RBP eCLIP11.43□□□□□ -0.582e-6■■■■□ 20
CASP3-201ENST00000308394 PQBP1O60828 265 aaKnown RBP11.43□□□□□ -0.58
CASP3-201ENST00000308394 WEE2P0C1S8 567 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 CYP11B1P15538 503 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 CDK7P50613 346 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 RBP5P82980 135 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 FBXO46Q6PJ61 603 aaPredicted RBP11.43□□□□□ -0.58
CASP3-201ENST00000308394 PCGF5Q86SE9 256 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 DNAAF5Q86Y56 855 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 HACE1Q8IYU2 909 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 RPUSD2Q8IZ73 545 aaKnown RBP11.43□□□□□ -0.58
CASP3-201ENST00000308394 TXLNBQ8N3L3 684 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 USP38Q8NB14 1042 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 RNF169Q8NCN4 708 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 BEST2Q8NFU1 509 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 LNX1Q8TBB1 728 aaPredicted RBP11.43□□□□□ -0.58
CASP3-201ENST00000308394 EPS8L1Q8TE68 723 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 C18orf25Q96B23 403 aaPredicted RBP11.43□□□□□ -0.58
CASP3-201ENST00000308394 HPDLQ96IR7 371 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 TUBGCP4Q9UGJ1 667 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 DERAQ9Y315 318 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 SMIM28A0A1B0GU29 152 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 CALCAP01258 141 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 MMEP08473 750 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 HSPA8P11142 646 aaKnown RBP11.43□□□□□ -0.58
CASP3-201ENST00000308394 ITGA4P13612 1032 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 ANK1P16157 1881 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 ANXA13P27216 316 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 TBC1D25Q3MII6 688 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 ZNF569Q5MCW4 686 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 NOP9Q86U38 636 aaKnown RBP11.43□□□□□ -0.58
CASP3-201ENST00000308394 FAM126BQ8IXS8 530 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 KIF18AQ8NI77 898 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 ADAM2Q99965 735 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 TSGA10Q9BZW7 698 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 NACA2Q9H009 215 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 POLIQ9UNA4 740 aa11.43□□□□□ -0.58
CASP3-201ENST00000308394 MEIS3P2A8K0S8 358 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 MGEA5O60502 916 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 TUBB4AP04350 444 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 ACO1P21399 889 aaKnown RBP11.42□□□□□ -0.58
CASP3-201ENST00000308394 NAB2Q15742 525 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 CAGE1Q8TC20 777 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 LPPQ93052 612 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 ZFP42Q96MM3 310 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 PACSIN1Q9BY11 444 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 UBQLN1Q9UMX0 589 aaKnown RBP11.42□□□□□ -0.58
CASP3-201ENST00000308394 ASPAP45381 313 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 MYO1EQ12965 1108 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 ZBTB6Q15916 424 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 PREPLQ4J6C6 727 aaPredicted RBP11.42□□□□□ -0.58
CASP3-201ENST00000308394 C10orf76Q5T2E6 689 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 RBBP8NLQ8NC74 664 aaPredicted RBP11.42□□□□□ -0.58
CASP3-201ENST00000308394 SLC30A5Q8TAD4 765 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 ZNF333Q96JL9 665 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 WDR24Q96S15 920 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 MMS19Q96T76 1030 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 CISHQ9NSE2 258 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 SQORQ9Y6N5 450 aa11.42□□□□□ -0.58
CASP3-201ENST00000308394 TLR3O15455 904 aaKnown RBP11.41□□□□□ -0.58
CASP3-201ENST00000308394 XPOTO43592 962 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms