RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ADSSP30520 456 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 PRELPP51888 382 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 PPP3CAQ08209 521 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 USP4Q13107 963 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 RASA3Q14644 834 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 FAM71AQ8IYT1 594 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 PDCD7Q8N8D1 485 aaKnown RBP18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 MAK16Q9BXY0 300 aaKnown RBP18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 HERC5Q9UII4 1024 aaKnown RBP18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 A0A0G2JND7 137 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 CLRN2A0PK11 232 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 ANKS1BQ7Z6G8 1248 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 TRIM74Q86UV6 250 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 TRIM73Q86UV7 250 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 FAM83AQ86UY5 434 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 CSRNP1Q96S65 589 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 MYOZ2Q9NPC6 264 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 ANGPTL2Q9UKU9 493 aa18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 G3BP2Q9UN86 482 aaKnown RBP18.66■□□□□ 0.58
CDKN1B-201ENST00000228872 A8MXQ7 604 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 TCP10L2B9ZVM9 353 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 FAM86B1E9PN63 330 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 FAM86B2P0C5J1 330 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 AMPD1P23109 780 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 PIK3CAP42336 1068 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 QRICH1Q2TAL8 776 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 P3H1Q32P28 736 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 LIN52Q52LA3 116 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 FAM20AQ96MK3 541 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 HEMGNQ9BXL5 484 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 PCDHA1Q9Y5I3 950 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 SBF1O95248 1867 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 WDR91A4D1P6 747 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 F5H6K3 240 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 MEIS2O14770 477 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 DNAJC6O75061 913 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 ADRA1DP25100 572 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 KLRC2P26717 231 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 GCLMP48507 274 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 CETN1Q12798 172 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 AP3B2Q13367 1082 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 FASTKD3Q14CZ7 662 aaKnown RBP18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 SLC9A9Q8IVB4 645 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 FAM178BQ8IXR5 827 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 MKL1Q969V6 931 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 SKA1Q96BD8 255 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 MRRFQ96E11 262 aaKnown RBP18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 HAPLN3Q96S86 360 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 ADAM33Q9BZ11 813 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 ANAPC7Q9UJX3 599 aa18.65■□□□□ 0.58
CDKN1B-201ENST00000228872 PIK3CDO00329 1044 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 WNT10BO00744 389 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 MSH4O15457 936 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 PENKP01210 267 aaPredicted RBP18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 RALAP11233 206 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 MAPK4P31152 587 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 CDK7P50613 346 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 KLF1Q13351 362 aaPredicted RBP18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 LSAMPQ13449 338 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 CCNG2Q16589 344 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 IZUMO2Q6UXV1 221 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 CAPN12Q6ZSI9 719 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 TMEM179Q6ZVK1 233 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 STXBP4Q6ZWJ1 553 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 ZNF276Q8N554 614 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 DDX27Q96GQ7 796 aaKnown RBP18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 TRIM55Q9BYV6 548 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 FBXO6Q9NRD1 293 aaPredicted RBP18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 NYAP2Q9P242 653 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 EEF2P13639 858 aaKnown RBP18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 SERPINB3P29508 390 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 KRT72Q14CN4 511 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 HP1BP3Q5SSJ5 553 aaPredicted RBP18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 KREMEN1Q96MU8 473 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 CENPKQ9BS16 269 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 VPS37BQ9H9H4 285 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 SEL1LQ9UBV2 794 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 COMMD3-BMI1R4GMX3 469 aa18.64■□□□□ 0.57
CDKN1B-201ENST00000228872 RARBP10826 455 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 ESRRAP11474 423 aaPredicted RBP18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 KRT4P19013 534 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 ARFIP2P53365 341 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 CDK16Q00536 496 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 PPP2R5CQ13362 524 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 ECSITQ9BQ95 431 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 SSU72Q9NP77 194 aaKnown RBP18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 RPS6KL1Q9Y6S9 549 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 P4HA2O15460 535 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 PGM1P36871 562 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 VAMP7P51809 220 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 RAP1GDS1P52306 607 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 DSG1Q02413 1049 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 ZBTB16Q05516 673 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 CCDC62Q6P9F0 684 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 RFX8Q6ZV50 586 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 OSBPL8Q9BZF1 889 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 PSMC3IPQ9P2W1 217 aaPredicted RBP18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 TMCO1Q9UM00 188 aa18.63■□□□□ 0.57
CDKN1B-201ENST00000228872 TBC1D30Q9Y2I9 924 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms