RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C YJR111CP47148 283 aaKnown RBP1.84□□□□□ -2.11
CCL1YPR025C EFM5P53200 248 aaKnown RBP1.84□□□□□ -2.11
CCL1YPR025C SNC2P33328 115 aa1.83□□□□□ -2.12
CCL1YPR025C GVP36P40531 326 aaKnown RBP1.83□□□□□ -2.12
CCL1YPR025C HNT1Q04344 158 aaKnown RBP1.83□□□□□ -2.12
CCL1YPR025C RIO1Q12196 484 aaKnown RBP1.83□□□□□ -2.12
CCL1YPR025C YDL085C-AQ3E7B7 68 aaKnown RBP1.83□□□□□ -2.12
CCL1YPR025C RPS24AP0CX31 135 aaKnown RBP1.82□□□□□ -2.12
CCL1YPR025C RPS24BP0CX32 135 aaKnown RBP1.82□□□□□ -2.12
CCL1YPR025C CKS1P20486 150 aaKnown RBP1.82□□□□□ -2.12
CCL1YPR025C YGL010WP25338 174 aa1.82□□□□□ -2.12
CCL1YPR025C MGT1P26188 188 aa1.82□□□□□ -2.12
CCL1YPR025C UBC6P33296 250 aaPredicted RBP1.82□□□□□ -2.12
CCL1YPR025C AME1P38313 324 aa1.82□□□□□ -2.12
CCL1YPR025C GAA1P39012 614 aa1.82□□□□□ -2.12
CCL1YPR025C AIM34Q03673 198 aa1.82□□□□□ -2.12
CCL1YPR025C YLR162WQ06235 118 aa1.82□□□□□ -2.12
CCL1YPR025C DGA1Q08650 418 aa1.82□□□□□ -2.12
CCL1YPR025C YLR050CQ12155 161 aaKnown RBP1.82□□□□□ -2.12
CCL1YPR025C PDR18P53756 1333 aa1.82□□□□□ -2.12
CCL1YPR025C MET5P47169 1442 aa1.82□□□□□ -2.12
CCL1YPR025C QCR2P07257 368 aa1.81□□□□□ -2.12
CCL1YPR025C AHC2P25649 128 aa1.81□□□□□ -2.12
CCL1YPR025C SER2P42941 309 aa1.81□□□□□ -2.12
CCL1YPR025C SAY1P53324 424 aa1.81□□□□□ -2.12
CCL1YPR025C YDR274CP87283 123 aa1.81□□□□□ -2.12
CCL1YPR025C SHH4Q06236 168 aa1.81□□□□□ -2.12
CCL1YPR025C PEX11Q12462 236 aa1.81□□□□□ -2.12
CCL1YPR025C YKL102CP34249 101 aa1.8□□□□□ -2.12
CCL1YPR025C YBR220CP38318 560 aa1.8□□□□□ -2.12
CCL1YPR025C FMP32P43557 207 aa1.8□□□□□ -2.12
CCL1YPR025C GPI17Q04080 534 aa1.8□□□□□ -2.12
CCL1YPR025C HPT1Q04178 221 aaKnown RBP1.8□□□□□ -2.12
CCL1YPR025C YLR031WQ07978 186 aa1.8□□□□□ -2.12
CCL1YPR025C FSF1Q12029 327 aaKnown RBP1.8□□□□□ -2.12
CCL1YPR025C YLR422WQ06409 1932 aa1.79□□□□□ -2.12
CCL1YPR025C CPA1P07258 411 aaKnown RBP1.79□□□□□ -2.12
CCL1YPR025C SEC14P24280 304 aaKnown RBP1.79□□□□□ -2.12
CCL1YPR025C PAN3P36102 679 aaPredicted RBP1.79□□□□□ -2.12
CCL1YPR025C YEA4P40004 342 aa1.79□□□□□ -2.12
CCL1YPR025C SOL1P50278 321 aa1.79□□□□□ -2.12
CCL1YPR025C PGA1P53896 198 aa1.79□□□□□ -2.12
CCL1YPR025C HSK3P69852 69 aa1.79□□□□□ -2.12
CCL1YPR025C NUP49Q02199 472 aa1.79□□□□□ -2.12
CCL1YPR025C YOL014WQ08110 124 aa1.79□□□□□ -2.12
CCL1YPR025C YPR014CQ6B0W2 109 aa1.79□□□□□ -2.12
CCL1YPR025C FAS1P07149 2051 aaKnown RBP1.78□□□□□ -2.12
CCL1YPR025C DUR1,2P32528 1835 aaKnown RBP1.78□□□□□ -2.12
CCL1YPR025C RPL2AP0CX45 254 aaKnown RBP1.78□□□□□ -2.12
CCL1YPR025C RPL2BP0CX46 254 aaKnown RBP1.78□□□□□ -2.12
CCL1YPR025C YBR209WP38311 105 aa1.78□□□□□ -2.12
CCL1YPR025C YBR285WP38354 144 aa1.78□□□□□ -2.12
CCL1YPR025C AIM2P39721 246 aa1.78□□□□□ -2.12
CCL1YPR025C RPL13BP40212 199 aaKnown RBP1.78□□□□□ -2.12
CCL1YPR025C YFL019CP43576 117 aa1.78□□□□□ -2.12
CCL1YPR025C TDA4P47153 279 aa1.78□□□□□ -2.12
CCL1YPR025C YGL235WP53071 178 aa1.78□□□□□ -2.12
CCL1YPR025C MPC3P53311 146 aa1.78□□□□□ -2.12
CCL1YPR025C NAT3Q06504 195 aa1.78□□□□□ -2.12
CCL1YPR025C YOR342CQ12182 319 aa1.78□□□□□ -2.12
CCL1YPR025C MPD1Q12404 318 aaKnown RBP1.78□□□□□ -2.12
CCL1YPR025C RPL13AQ12690 199 aaPredicted RBP1.78□□□□□ -2.12
CCL1YPR025C YML100W-AQ8TGT0 57 aa1.78□□□□□ -2.12
CCL1YPR025C ODC2Q99297 307 aa1.78□□□□□ -2.12
CCL1YPR025C YAR023CD6VPM8 179 aa1.77□□□□□ -2.13
CCL1YPR025C CMD1P06787 147 aaKnown RBP1.77□□□□□ -2.13
CCL1YPR025C FPR1P20081 114 aaKnown RBP1.77□□□□□ -2.13
CCL1YPR025C TMA19P35691 167 aaKnown RBP1.77□□□□□ -2.13
CCL1YPR025C KDX1P36005 433 aa1.77□□□□□ -2.13
CCL1YPR025C TVP38P36164 337 aa1.77□□□□□ -2.13
CCL1YPR025C FIG1P38224 298 aa1.77□□□□□ -2.13
CCL1YPR025C YER134CP40081 178 aa1.77□□□□□ -2.13
CCL1YPR025C YFH7P43591 353 aa1.77□□□□□ -2.13
CCL1YPR025C GPI14P47088 403 aaKnown RBP1.77□□□□□ -2.13
CCL1YPR025C TMA22P47089 198 aaPredicted RBP1.77□□□□□ -2.13
CCL1YPR025C ANT1Q06497 328 aa1.77□□□□□ -2.13
CCL1YPR025C DGK1Q12382 290 aa1.77□□□□□ -2.13
CCL1YPR025C QCR8P08525 94 aa1.76□□□□□ -2.13
CCL1YPR025C YCR023CP25351 611 aa1.76□□□□□ -2.13
CCL1YPR025C TFC1P32367 649 aa1.76□□□□□ -2.13
CCL1YPR025C DER1P38307 211 aa1.76□□□□□ -2.13
CCL1YPR025C SLM6P38343 150 aa1.76□□□□□ -2.13
CCL1YPR025C NSG1P38837 291 aa1.76□□□□□ -2.13
CCL1YPR025C MTW1P39731 289 aa1.76□□□□□ -2.13
CCL1YPR025C ERJ5P43613 295 aaPredicted RBP1.76□□□□□ -2.13
CCL1YPR025C YMR099CQ03161 297 aaKnown RBP1.76□□□□□ -2.13
CCL1YPR025C DYN3Q04949 312 aa1.76□□□□□ -2.13
CCL1YPR025C YLR053CQ12026 108 aa1.76□□□□□ -2.13
CCL1YPR025C ATG40Q99325 256 aa1.76□□□□□ -2.13
CCL1YPR025C PET20Q99373 253 aa1.76□□□□□ -2.13
CCL1YPR025C POR1P04840 283 aaKnown RBP1.75□□□□□ -2.13
CCL1YPR025C UPS2P35200 230 aa1.75□□□□□ -2.13
CCL1YPR025C CSH1P38287 376 aa1.75□□□□□ -2.13
CCL1YPR025C EDC3P39998 551 aaKnown RBP1.75□□□□□ -2.13
CCL1YPR025C RFC2P40348 353 aa1.75□□□□□ -2.13
CCL1YPR025C KNH1P50112 268 aa1.75□□□□□ -2.13
CCL1YPR025C POP3P53833 195 aaPredicted RBP1.75□□□□□ -2.13
CCL1YPR025C YPR127WQ06494 345 aa1.75□□□□□ -2.13
CCL1YPR025C NSL1Q12143 216 aa1.75□□□□□ -2.13
CCL1YPR025C RDI1Q12434 202 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms