RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W YJL225CP40889 1758 aa2.21□□□□□ -2.06
TRM112YNR046W DDI2P0CH63 225 aa2.2□□□□□ -2.06
TRM112YNR046W DDI3P0CH64 225 aa2.2□□□□□ -2.06
TRM112YNR046W MDH2P22133 377 aa2.2□□□□□ -2.06
TRM112YNR046W TRR1P29509 319 aaKnown RBP2.2□□□□□ -2.06
TRM112YNR046W OCH1P31755 480 aa2.2□□□□□ -2.06
TRM112YNR046W SHE2P36068 246 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
TRM112YNR046W YAP3P38749 330 aa2.2□□□□□ -2.06
TRM112YNR046W FCY21P40039 528 aa2.2□□□□□ -2.06
TRM112YNR046W CIN5P40917 295 aa2.2□□□□□ -2.06
TRM112YNR046W FMP32P43557 207 aa2.2□□□□□ -2.06
TRM112YNR046W SKI6P46948 246 aaPredicted RBP2.2□□□□□ -2.06
TRM112YNR046W BOL2P53082 120 aa2.2□□□□□ -2.06
TRM112YNR046W YGL204CP53089 101 aa2.2□□□□□ -2.06
TRM112YNR046W ARO8P53090 500 aaKnown RBP2.2□□□□□ -2.06
TRM112YNR046W DYN3Q04949 312 aa2.2□□□□□ -2.06
TRM112YNR046W YLR053CQ12026 108 aa2.2□□□□□ -2.06
TRM112YNR046W NSL1Q12143 216 aa2.2□□□□□ -2.06
TRM112YNR046W ODC2Q99297 307 aa2.2□□□□□ -2.06
TRM112YNR046W RAS2P01120 322 aaKnown RBP2.19□□□□□ -2.06
TRM112YNR046W GCY1P14065 312 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
TRM112YNR046W MGT1P26188 188 aa2.19□□□□□ -2.06
TRM112YNR046W CLG1P35190 452 aa2.19□□□□□ -2.06
TRM112YNR046W YBR209WP38311 105 aa2.19□□□□□ -2.06
TRM112YNR046W YEA4P40004 342 aa2.19□□□□□ -2.06
TRM112YNR046W PEP8P40335 379 aa2.19□□□□□ -2.06
TRM112YNR046W SER2P42941 309 aa2.19□□□□□ -2.06
TRM112YNR046W SBH2P52871 88 aa2.19□□□□□ -2.06
TRM112YNR046W JAC1P53193 184 aa2.19□□□□□ -2.06
TRM112YNR046W YPD1Q07688 167 aa2.19□□□□□ -2.06
TRM112YNR046W YHR086W-AQ3E746 53 aa2.19□□□□□ -2.06
TRM112YNR046W CPA1P07258 411 aaKnown RBP2.18□□□□□ -2.06
TRM112YNR046W CYC2P38909 366 aa2.18□□□□□ -2.06
TRM112YNR046W YER134CP40081 178 aa2.18□□□□□ -2.06
TRM112YNR046W AYR1P40471 297 aa2.18□□□□□ -2.06
TRM112YNR046W PHB1P40961 287 aa2.18□□□□□ -2.06
TRM112YNR046W APS3P47064 194 aa2.18□□□□□ -2.06
TRM112YNR046W MOG1P47123 218 aa2.18□□□□□ -2.06
TRM112YNR046W YGL235WP53071 178 aa2.18□□□□□ -2.06
TRM112YNR046W NQM1P53228 333 aaPredicted RBP2.18□□□□□ -2.06
TRM112YNR046W SAY1P53324 424 aa2.18□□□□□ -2.06
TRM112YNR046W RCF2P53721 224 aa2.18□□□□□ -2.06
TRM112YNR046W YNR077CP53758 84 aa2.18□□□□□ -2.06
TRM112YNR046W BUD25P85052 153 aa2.18□□□□□ -2.06
TRM112YNR046W NUP49Q02199 472 aa2.18□□□□□ -2.06
TRM112YNR046W AIM34Q03673 198 aa2.18□□□□□ -2.06
TRM112YNR046W YPR014CQ6B0W2 109 aa2.18□□□□□ -2.06
TRM112YNR046W ATG40Q99325 256 aa2.18□□□□□ -2.06
TRM112YNR046W UBC8P28263 218 aa2.17□□□□□ -2.06
TRM112YNR046W FZF1P32805 299 aa2.17□□□□□ -2.06
TRM112YNR046W PAN3P36102 679 aaPredicted RBP2.17□□□□□ -2.06
TRM112YNR046W OPY1P38271 328 aa2.17□□□□□ -2.06
TRM112YNR046W AVT2P39981 480 aa2.17□□□□□ -2.06
TRM112YNR046W EDC3P39998 551 aaKnown RBP2.17□□□□□ -2.06
TRM112YNR046W YER137CP40083 148 aaKnown RBP2.17□□□□□ -2.06
TRM112YNR046W YJR111CP47148 283 aaKnown RBP2.17□□□□□ -2.06
TRM112YNR046W TDA4P47153 279 aa2.17□□□□□ -2.06
TRM112YNR046W YMR315WQ04869 349 aaKnown RBP2.17□□□□□ -2.06
TRM112YNR046W MET5P47169 1442 aa2.17□□□□□ -2.06
TRM112YNR046W RAD50P12753 1312 aa2.17□□□□□ -2.06
TRM112YNR046W RPS28BP0C0X0 67 aaKnown RBP2.16□□□□□ -2.06
TRM112YNR046W AHC2P25649 128 aa2.16□□□□□ -2.06
TRM112YNR046W TFC1P32367 649 aa2.16□□□□□ -2.06
TRM112YNR046W CPR5P35176 225 aa2.16□□□□□ -2.06
TRM112YNR046W UPS2P35200 230 aa2.16□□□□□ -2.06
TRM112YNR046W SML1Q04964 104 aa2.16□□□□□ -2.06
TRM112YNR046W RFU1Q08003 200 aa2.16□□□□□ -2.06
TRM112YNR046W YOL014WQ08110 124 aa2.16□□□□□ -2.06
TRM112YNR046W RPS28AQ3E7X9 67 aaPredicted RBP2.16□□□□□ -2.06
TRM112YNR046W YML100W-AQ8TGT0 57 aa2.16□□□□□ -2.06
TRM112YNR046W PET54P10834 293 aa2.15□□□□□ -2.07
TRM112YNR046W SEC14P24280 304 aaKnown RBP2.15□□□□□ -2.07
TRM112YNR046W YKR041WP36134 250 aa2.15□□□□□ -2.07
TRM112YNR046W GAA1P39012 614 aa2.15□□□□□ -2.07
TRM112YNR046W LSM4P40070 187 aaKnown RBP2.15□□□□□ -2.07
TRM112YNR046W YGR201CP42936 225 aa2.15□□□□□ -2.07
TRM112YNR046W YFH7P43591 353 aa2.15□□□□□ -2.07
TRM112YNR046W ALB1P47019 175 aaPredicted RBP2.15□□□□□ -2.07
TRM112YNR046W PGA1P53896 198 aa2.15□□□□□ -2.07
TRM112YNR046W SHH4Q06236 168 aa2.15□□□□□ -2.07
TRM112YNR046W YLR050CQ12155 161 aaKnown RBP2.15□□□□□ -2.07
TRM112YNR046W MPD1Q12404 318 aaKnown RBP2.15□□□□□ -2.07
TRM112YNR046W PDR18P53756 1333 aa2.15□□□□□ -2.07
TRM112YNR046W RPO41P13433 1351 aaKnown RBP2.14□□□□□ -2.07
TRM112YNR046W YLR236CA0A023PZG4 107 aa2.14□□□□□ -2.07
TRM112YNR046W YAR023CD6VPM8 179 aa2.14□□□□□ -2.07
TRM112YNR046W POR1P04840 283 aaKnown RBP2.14□□□□□ -2.07
TRM112YNR046W NHP6AP11632 93 aaKnown RBP2.14□□□□□ -2.07
TRM112YNR046W UTP11P34247 250 aaPredicted RBP2.14□□□□□ -2.07
TRM112YNR046W YMR295CQ03559 197 aa2.14□□□□□ -2.07
TRM112YNR046W HPT1Q04178 221 aaKnown RBP2.14□□□□□ -2.07
TRM112YNR046W CUE4Q04201 117 aaPredicted RBP2.14□□□□□ -2.07
TRM112YNR046W YPR127WQ06494 345 aa2.14□□□□□ -2.07
TRM112YNR046W RDI1Q12434 202 aa2.14□□□□□ -2.07
TRM112YNR046W TAF2P23255 1407 aa2.14□□□□□ -2.07
TRM112YNR046W IDP1P21954 428 aaKnown RBP2.13□□□□□ -2.07
TRM112YNR046W NVJ1P38881 321 aa2.13□□□□□ -2.07
TRM112YNR046W YER076CP40049 302 aa2.13□□□□□ -2.07
TRM112YNR046W TMA20P89886 181 aaPredicted RBP2.13□□□□□ -2.07
TRM112YNR046W DYN2Q02647 92 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms