RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W YBR255C-AQ3E776 120 aa5.99□□□□□ -1.45
NUP53YMR153W TRP4P07285 380 aaPredicted RBP5.99□□□□□ -1.45
NUP53YMR153W MRPL3P36516 390 aa5.99□□□□□ -1.45
NUP53YMR153W NIF3P53081 288 aa5.99□□□□□ -1.45
NUP53YMR153W CPD1P53314 239 aa5.99□□□□□ -1.45
NUP53YMR153W VPS28Q02767 242 aa5.99□□□□□ -1.45
NUP53YMR153W TFB5Q3E7C1 72 aaPredicted RBP5.99□□□□□ -1.45
NUP53YMR153W URA5P13298 226 aaKnown RBP5.98□□□□□ -1.45
NUP53YMR153W MRP17P28778 131 aa5.98□□□□□ -1.45
NUP53YMR153W SUA5P32579 426 aa5.98□□□□□ -1.45
NUP53YMR153W SYG1P40528 902 aa5.98□□□□□ -1.45
NUP53YMR153W MRPL49P40858 161 aaPredicted RBP5.98□□□□□ -1.45
NUP53YMR153W YGL258W-AQ3E740 77 aa5.98□□□□□ -1.45
NUP53YMR153W SOD1P00445 154 aaKnown RBP5.97□□□□□ -1.45
NUP53YMR153W TPI1P00942 248 aaKnown RBP5.97□□□□□ -1.45
NUP53YMR153W PET494P07390 489 aaPredicted RBP5.97□□□□□ -1.45
NUP53YMR153W RPS8AP0CX39 200 aaKnown RBP5.97□□□□□ -1.45
NUP53YMR153W RPS8BP0CX40 200 aaKnown RBP5.97□□□□□ -1.45
NUP53YMR153W ERV1P27882 189 aa5.97□□□□□ -1.45
NUP53YMR153W UTR5P32630 166 aa5.97□□□□□ -1.45
NUP53YMR153W DYN2Q02647 92 aa5.97□□□□□ -1.45
NUP53YMR153W PEX10Q05568 337 aa5.97□□□□□ -1.45
NUP53YMR153W YCT1Q12235 531 aa5.97□□□□□ -1.45
NUP53YMR153W GRX2P17695 143 aaKnown RBP5.96□□□□□ -1.46
NUP53YMR153W YCR016WP25617 290 aaKnown RBP5.96□□□□□ -1.46
NUP53YMR153W YBR242WP38331 238 aa5.96□□□□□ -1.46
NUP53YMR153W YAR068WP39564 161 aa5.96□□□□□ -1.46
NUP53YMR153W YKE4P40544 346 aa5.96□□□□□ -1.46
NUP53YMR153W GRH1Q04410 372 aaKnown RBP5.96□□□□□ -1.46
NUP53YMR153W NHP6BP11633 99 aaKnown RBP5.95□□□□□ -1.46
NUP53YMR153W IMD2P38697 523 aaKnown RBP5.95□□□□□ -1.46
NUP53YMR153W YGR210CP42942 411 aa5.95□□□□□ -1.46
NUP53YMR153W YGR050CP53231 118 aa5.95□□□□□ -1.46
NUP53YMR153W YGR219WP53307 113 aa5.95□□□□□ -1.46
NUP53YMR153W MSO1P53604 210 aaKnown RBP5.95□□□□□ -1.46
NUP53YMR153W ACT1P60010 375 aaKnown RBP5.95□□□□□ -1.46
NUP53YMR153W LRS4Q04087 347 aaKnown RBP5.95□□□□□ -1.46
NUP53YMR153W MSC3Q05812 728 aa5.95□□□□□ -1.46
NUP53YMR153W RAD28Q12021 506 aa5.95□□□□□ -1.46
NUP53YMR153W COX2P00410 251 aa5.94□□□□□ -1.46
NUP53YMR153W RTC3P38804 111 aaPredicted RBP5.94□□□□□ -1.46
NUP53YMR153W NSA2P40078 261 aaKnown RBP5.94□□□□□ -1.46
NUP53YMR153W YNL194CP40169 301 aa5.94□□□□□ -1.46
NUP53YMR153W YIR035CP40579 254 aa5.94□□□□□ -1.46
NUP53YMR153W CAX4P53223 239 aa5.94□□□□□ -1.46
NUP53YMR153W SWT21P53873 357 aaPredicted RBP5.94□□□□□ -1.46
NUP53YMR153W EST3Q03096 181 aa5.94□□□□□ -1.46
NUP53YMR153W TDA6Q06466 467 aa5.94□□□□□ -1.46
NUP53YMR153W ENV7Q12003 364 aa5.94□□□□□ -1.46
NUP53YMR153W PAA1Q12447 191 aaKnown RBP5.94□□□□□ -1.46
NUP53YMR153W MDM10P18409 493 aa5.93□□□□□ -1.46
NUP53YMR153W MIC12P38341 106 aa5.93□□□□□ -1.46
NUP53YMR153W DOG2P38773 246 aa5.93□□□□□ -1.46
NUP53YMR153W DOG1P38774 246 aa5.93□□□□□ -1.46
NUP53YMR153W GET2P40056 285 aa5.93□□□□□ -1.46
NUP53YMR153W YPI1P43587 155 aa5.93□□□□□ -1.46
NUP53YMR153W ECM27P47144 725 aa5.93□□□□□ -1.46
NUP53YMR153W BUL1P48524 976 aa5.93□□□□□ -1.46
NUP53YMR153W NCE103P53615 221 aa5.93□□□□□ -1.46
NUP53YMR153W YLR281CQ05863 155 aa5.93□□□□□ -1.46
NUP53YMR153W SEC22P22214 214 aa5.92□□□□□ -1.46
NUP53YMR153W YKL162CP36052 402 aa5.92□□□□□ -1.46
NUP53YMR153W SDH4P37298 181 aa5.92□□□□□ -1.46
NUP53YMR153W RRT1P38192 103 aa5.92□□□□□ -1.46
NUP53YMR153W CDS1P38221 457 aa5.92□□□□□ -1.46
NUP53YMR153W WSS1P38838 269 aa5.92□□□□□ -1.46
NUP53YMR153W ARO8P53090 500 aaKnown RBP5.92□□□□□ -1.46
NUP53YMR153W ERV25P54837 211 aaKnown RBP5.92□□□□□ -1.46
NUP53YMR153W PDC2P32896 925 aa5.91□□□□□ -1.46
NUP53YMR153W YBL071CP38185 102 aa5.91□□□□□ -1.46
NUP53YMR153W QDR3P38227 689 aa5.91□□□□□ -1.46
NUP53YMR153W ECM33P38248 429 aaKnown RBP5.91□□□□□ -1.46
NUP53YMR153W HAM1P47119 197 aaKnown RBP5.91□□□□□ -1.46
NUP53YMR153W NUP42P49686 430 aaKnown RBP5.91□□□□□ -1.46
NUP53YMR153W DUO1P53168 247 aaKnown RBP5.91□□□□□ -1.46
NUP53YMR153W YLR224WQ05947 369 aa5.91□□□□□ -1.46
NUP53YMR153W RRG8Q06109 277 aa5.91□□□□□ -1.46
NUP53YMR153W RXT3Q07458 294 aa5.91□□□□□ -1.46
NUP53YMR153W AIM45Q12480 344 aaKnown RBP5.91□□□□□ -1.46
NUP53YMR153W MDN1Q12019 4910 aaKnown RBP5.91□□□□□ -1.46
NUP53YMR153W ARG80P07249 177 aa5.91□□□□□ -1.46
NUP53YMR153W YRA2P36036 203 aaKnown RBP RIP-Chip data5.91□□□□□ -1.46not detected
NUP53YMR153W MPC2P38857 129 aa5.91□□□□□ -1.46
NUP53YMR153W SNU13P39990 126 aaKnown RBP5.91□□□□□ -1.46
NUP53YMR153W YDR274CP87283 123 aa5.91□□□□□ -1.46
NUP53YMR153W YMR090WQ04304 227 aaKnown RBP5.91□□□□□ -1.46
NUP53YMR153W TRI1Q05024 226 aa5.91□□□□□ -1.46
NUP53YMR153W FRQ1Q06389 190 aa5.91□□□□□ -1.46
NUP53YMR153W MRS3P10566 314 aa5.9□□□□□ -1.47
NUP53YMR153W FCY2P17064 533 aa5.9□□□□□ -1.47
NUP53YMR153W TIP1P27654 210 aaPredicted RBP5.9□□□□□ -1.47
NUP53YMR153W ALK2P32789 676 aaPredicted RBP5.9□□□□□ -1.47
NUP53YMR153W YER137CP40083 148 aaKnown RBP5.9□□□□□ -1.47
NUP53YMR153W RPL13BP40212 199 aaKnown RBP5.9□□□□□ -1.47
NUP53YMR153W PKP2P53170 491 aa5.9□□□□□ -1.47
NUP53YMR153W YIF1P53845 314 aaKnown RBP5.9□□□□□ -1.47
NUP53YMR153W DCS1Q06151 350 aa5.9□□□□□ -1.47
NUP53YMR153W YOR352WQ08816 343 aa5.9□□□□□ -1.47
NUP53YMR153W RPL13AQ12690 199 aaPredicted RBP5.9□□□□□ -1.47
NUP53YMR153W CYC3P06182 269 aa5.89□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms