RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MVP1	YMR004W	PEX11	Q12462	236 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	MHT1	Q12525	324 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	YIL177C	P40434	1758 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	YJL225C	P40889	1758 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	SPO13	P23624	291 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	NUF2	P33895	451 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	KDX1	P36005	433 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	OPY1	P38271	328 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	DER1	P38307	211 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	YBR285W	P38354	144 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	NSG1	P38837	291 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	YEA4	P40004	342 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	SBH2	P52871	88 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	TIM13	P53299	105 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	MPA43	P53583	542 aa	Predicted RBP	0.99	□□□□□ -2.25
MVP1	YMR004W	YNR062C	P53748	327 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	SLM2	P53955	656 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	DAD3	P69850	94 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	HSK3	P69852	69 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	SPG3	Q04398	127 aa	Predicted RBP	0.99	□□□□□ -2.25
MVP1	YMR004W	NAT3	Q06504	195 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	EMC6	Q12431	108 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	YLR412C-A	Q3E742	68 aa		0.99	□□□□□ -2.25
MVP1	YMR004W	YAR023C	D6VPM8	179 aa		0.98	□□□□□ -2.25
MVP1	YMR004W	BUB2	P26448	306 aa	Predicted RBP	0.98	□□□□□ -2.25
MVP1	YMR004W	RPC19	P28000	142 aa	Known RBP	0.98	□□□□□ -2.25
MVP1	YMR004W	YET1	P35723	206 aa		0.98	□□□□□ -2.25
MVP1	YMR004W	YOR062C	P36025	268 aa		0.98	□□□□□ -2.25
MVP1	YMR004W	PAN3	P36102	679 aa	Predicted RBP	0.98	□□□□□ -2.25
MVP1	YMR004W	YAP3	P38749	330 aa		0.98	□□□□□ -2.25
MVP1	YMR004W	SVP26	P38869	228 aa		0.98	□□□□□ -2.25
MVP1	YMR004W	RFC2	P40348	353 aa		0.98	□□□□□ -2.25
MVP1	YMR004W	GLR1	P41921	483 aa	Known RBP	0.98	□□□□□ -2.25
MVP1	YMR004W	LSM1	P47017	172 aa	Known RBP	0.98	□□□□□ -2.25
MVP1	YMR004W	YDR274C	P87283	123 aa		0.98	□□□□□ -2.25
MVP1	YMR004W	YMR295C	Q03559	197 aa		0.98	□□□□□ -2.25
MVP1	YMR004W	CGI121	Q03705	181 aa	Known RBP	0.98	□□□□□ -2.25
MVP1	YMR004W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.98	□□□□□ -2.25	not detected
MVP1	YMR004W	YOR342C	Q12182	319 aa		0.98	□□□□□ -2.25
MVP1	YMR004W	YDL180W	Q12301	547 aa		0.98	□□□□□ -2.25
MVP1	YMR004W	EFG1	Q3E705	233 aa	Known RBP	0.98	□□□□□ -2.25
MVP1	YMR004W	RAS2	P01120	322 aa	Known RBP	0.97	□□□□□ -2.25
MVP1	YMR004W	RPS28B	P0C0X0	67 aa	Known RBP	0.97	□□□□□ -2.25
MVP1	YMR004W	SCL1	P21243	252 aa	Known RBP	0.97	□□□□□ -2.25
MVP1	YMR004W	PEX4	P29340	183 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	PHO88	P38264	188 aa	Predicted RBP	0.97	□□□□□ -2.25
MVP1	YMR004W	POP7	P38291	140 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	ERV15	P38312	142 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	VTC1	P40046	129 aa	RIP-Chip data	0.97	□□□□□ -2.25	not detected
MVP1	YMR004W	YNL200C	P40165	246 aa	Known RBP	0.97	□□□□□ -2.25
MVP1	YMR004W	TIR3	P40552	269 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	RPL33B	P41056	107 aa	Known RBP	0.97	□□□□□ -2.25
MVP1	YMR004W	YFL019C	P43576	117 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	YFH7	P43591	353 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	CIS3	P47001	227 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	GPI14	P47088	403 aa	Known RBP	0.97	□□□□□ -2.25
MVP1	YMR004W	MOG1	P47123	218 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	TTI2	P47168	421 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	ERG25	P53045	309 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	YGL235W	P53071	178 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	BOL2	P53082	120 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	MRPS8	Q03799	155 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	PKR1	Q03880	122 aa	Known RBP	0.97	□□□□□ -2.25
MVP1	YMR004W	RDS3	Q06835	107 aa	Predicted RBP	0.97	□□□□□ -2.25
MVP1	YMR004W	YOL014W	Q08110	124 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	ATO3	Q12359	275 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	DGK1	Q12382	290 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	RPS28A	Q3E7X9	67 aa	Predicted RBP	0.97	□□□□□ -2.25
MVP1	YMR004W	YML100W-A	Q8TGT0	57 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	ATG40	Q99325	256 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	PET20	Q99373	253 aa		0.97	□□□□□ -2.25
MVP1	YMR004W	FAS1	P07149	2051 aa	Known RBP	0.97	□□□□□ -2.25
MVP1	YMR004W	POR1	P04840	283 aa	Known RBP	0.96	□□□□□ -2.26
MVP1	YMR004W	YCR023C	P25351	611 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	UBC8	P28263	218 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	TFC1	P32367	649 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	ACP1	P32463	125 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	YBR209W	P38311	105 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	SOK1	P40317	901 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	CUP9	P41817	306 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	SOL1	P50278	321 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	YGL101W	P53144	215 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	MPC3	P53311	146 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	SAY1	P53324	424 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	HHT1	P61830	136 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	YDC1	Q02896	317 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	VPS71	Q03433	280 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	RAV2	Q03956	351 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	YPR127W	Q06494	345 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	DAS2	Q12084	232 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	YLR046C	Q12253	270 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	MET5	P47169	1442 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	PDR18	P53756	1333 aa		0.96	□□□□□ -2.26
MVP1	YMR004W	YOR1	P53049	1477 aa		0.95	□□□□□ -2.26
MVP1	YMR004W	UBI4	P0CG63	381 aa	Known RBP	0.95	□□□□□ -2.26
MVP1	YMR004W	DDI2	P0CH63	225 aa		0.95	□□□□□ -2.26
MVP1	YMR004W	DDI3	P0CH64	225 aa		0.95	□□□□□ -2.26
MVP1	YMR004W	TIR1	P10863	254 aa		0.95	□□□□□ -2.26
MVP1	YMR004W	PHO85	P17157	305 aa		0.95	□□□□□ -2.26
MVP1	YMR004W	SLM6	P38343	150 aa		0.95	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms