RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	OTU1	P43558	301 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	IKS1	P47042	667 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	YLR050C	Q12155	161 aa	Known RBP	4.93	□□□□□ -1.62
DBP9	YLR276C	MRPL23	Q12487	163 aa	Predicted RBP	4.93	□□□□□ -1.62
DBP9	YLR276C	YLR146W-A	Q2V2P1	62 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	POR1	P04840	283 aa	Known RBP	4.93	□□□□□ -1.62
DBP9	YLR276C	YER190C-B	P0CX94	160 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	YEL077W-A	P0CX95	160 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	YGR296C-B	P0CX96	160 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	YPL283W-B	P0CX97	160 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	YPR204C-A	P0CX98	160 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	YCR006C	P25350	157 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	OCH1	P31755	480 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	SOR1	P35497	357 aa	Known RBP	4.93	□□□□□ -1.62
DBP9	YLR276C	FLO5	P38894	1075 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	YIL012W	P40551	113 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	HHT1	P61830	136 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	MET31	Q03081	177 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	GIS1	Q03833	894 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	SOR2	Q07786	357 aa		4.93	□□□□□ -1.62
DBP9	YLR276C	MSF1	P08425	469 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	PAU16	P35994	123 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	UMP1	P38293	148 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	WSC4	P38739	605 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	PRE5	P40302	234 aa	Known RBP	4.92	□□□□□ -1.62
DBP9	YLR276C	YPS6	P40583	537 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	SAS2	P40963	338 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	YJL028W	P47062	111 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	VPS25	P47142	202 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	BUD25	P85052	153 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	MRX8	Q05473	314 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	CDD1	Q06549	142 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	ISD11	Q6Q560	94 aa		4.92	□□□□□ -1.62
DBP9	YLR276C	QCR2	P07257	368 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	YCR023C	P25351	611 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	PPZ2	P33329	710 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	PRP18	P33411	251 aa	Predicted RBP	4.91	□□□□□ -1.62
DBP9	YLR276C	MOH1	P38191	138 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	YAL037W	P39728	267 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	HMF1	P40037	129 aa	Known RBP	4.91	□□□□□ -1.62
DBP9	YLR276C	COQ5	P49017	307 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	PGA1	P53896	198 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	HNT1	Q04344	158 aa	Known RBP	4.91	□□□□□ -1.62
DBP9	YLR276C	TAZ1	Q06510	381 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	DET1	Q99288	334 aa	Known RBP	4.91	□□□□□ -1.62
DBP9	YLR276C	CCH1	P50077	2039 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	MRP49	P32388	137 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	MNS1	P32906	549 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	MRPL27	P36526	146 aa	Predicted RBP	4.91	□□□□□ -1.62
DBP9	YLR276C	ECM33	P38248	429 aa	Known RBP	4.91	□□□□□ -1.62
DBP9	YLR276C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
DBP9	YLR276C	YMR206W	Q03695	313 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	TSA2	Q04120	196 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	YPR174C	Q06616	221 aa	Predicted RBP	4.91	□□□□□ -1.62
DBP9	YLR276C	PRM3	Q08931	133 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	GEP5	Q12393	293 aa		4.91	□□□□□ -1.62
DBP9	YLR276C	ADH1	P00330	348 aa	Known RBP	4.9	□□□□□ -1.63
DBP9	YLR276C	AQY1	P0CD91	305 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	MRS4	P23500	304 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	SCO1	P23833	295 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	RPL14A	P36105	138 aa	Known RBP	4.9	□□□□□ -1.63
DBP9	YLR276C	SLM6	P38343	150 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	RPL14B	P38754	138 aa	Known RBP	4.9	□□□□□ -1.63
DBP9	YLR276C	YND1	P40009	630 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	YER134C	P40081	178 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	COX15	P40086	486 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	EMC4	P53073	190 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	DUG3	P53871	357 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	DAD3	P69850	94 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	YMR166C	Q03829	368 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	DPP1	Q05521	289 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	LDS2	Q08218	356 aa		4.9	□□□□□ -1.63
DBP9	YLR276C	YPR096C	O13587	100 aa		4.89	□□□□□ -1.63
DBP9	YLR276C	YPT1	P01123	206 aa	Known RBP	4.89	□□□□□ -1.63
DBP9	YLR276C	DOG2	P38773	246 aa		4.89	□□□□□ -1.63
DBP9	YLR276C	YHR130C	P38834	111 aa		4.89	□□□□□ -1.63
DBP9	YLR276C	ERJ5	P43613	295 aa	Predicted RBP	4.89	□□□□□ -1.63
DBP9	YLR276C	CIN2	P46670	268 aa		4.89	□□□□□ -1.63
DBP9	YLR276C	TTI2	P47168	421 aa		4.89	□□□□□ -1.63
DBP9	YLR276C	YGR015C	P53208	328 aa		4.89	□□□□□ -1.63
DBP9	YLR276C	SNT309	Q06091	175 aa	Predicted RBP	4.89	□□□□□ -1.63
DBP9	YLR276C	YPR114W	Q06107	315 aa		4.89	□□□□□ -1.63
DBP9	YLR276C	MCH4	Q08268	501 aa		4.89	□□□□□ -1.63
DBP9	YLR276C	CDC43	P18898	376 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	TRR1	P29509	319 aa	Known RBP	4.88	□□□□□ -1.63
DBP9	YLR276C	YKL070W	P36087	169 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	ARC40	P38328	384 aa	Known RBP	4.88	□□□□□ -1.63
DBP9	YLR276C	YHR127W	P38833	243 aa	Known RBP	4.88	□□□□□ -1.63
DBP9	YLR276C	HSP10	P38910	106 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	SBH2	P52871	88 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	PDR17	P53844	350 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	IZH1	Q03419	316 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	MZM1	Q03429	123 aa	Predicted RBP	4.88	□□□□□ -1.63
DBP9	YLR276C	DIC1	Q06143	298 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	YOL024W	Q08172	172 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	GEP3	Q08622	556 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	YOR338W	Q99326	363 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	COX9	P07255	59 aa		4.88	□□□□□ -1.63
DBP9	YLR276C	SEC4	P07560	215 aa	Known RBP	4.88	□□□□□ -1.63
DBP9	YLR276C	YCR007C	P25354	239 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms