RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeast

Gene YPT6, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT6	YLR262C	RNH1	Q04740	348 aa		0.95	□□□□□ -2.26
YPT6	YLR262C	RNH202	Q05635	350 aa		0.95	□□□□□ -2.26
YPT6	YLR262C	PRP11	Q07350	266 aa	Predicted RBP	0.95	□□□□□ -2.26
YPT6	YLR262C	SLH1	P53327	1967 aa	Known RBP	0.95	□□□□□ -2.26
YPT6	YLR262C	COX8	P04039	78 aa		0.94	□□□□□ -2.26
YPT6	YLR262C	CDC36	P06100	191 aa	Predicted RBP	0.94	□□□□□ -2.26
YPT6	YLR262C	SER2	P42941	309 aa		0.94	□□□□□ -2.26
YPT6	YLR262C	ARP3	P47117	449 aa	Known RBP	0.94	□□□□□ -2.26
YPT6	YLR262C	YAR023C	D6VPM8	179 aa		0.93	□□□□□ -2.26
YPT6	YLR262C	YER188C-A	P0C0V2	99 aa		0.93	□□□□□ -2.26
YPT6	YLR262C	CNB1	P25296	175 aa		0.93	□□□□□ -2.26
YPT6	YLR262C	ECM4	P36156	370 aa		0.93	□□□□□ -2.26
YPT6	YLR262C	AIM2	P39721	246 aa		0.93	□□□□□ -2.26
YPT6	YLR262C	YMR295C	Q03559	197 aa		0.93	□□□□□ -2.26
YPT6	YLR262C	FUS2	Q05670	677 aa		0.93	□□□□□ -2.26
YPT6	YLR262C	MRS1	P07266	363 aa		0.92	□□□□□ -2.26
YPT6	YLR262C	PAM17	P36147	197 aa		0.92	□□□□□ -2.26
YPT6	YLR262C	YER134C	P40081	178 aa		0.92	□□□□□ -2.26
YPT6	YLR262C	YPR013C	Q12145	317 aa		0.92	□□□□□ -2.26
YPT6	YLR262C	YCL012C	Q8J0M4	134 aa		0.92	□□□□□ -2.26
YPT6	YLR262C	MATALPHA2	P0CY08	210 aa		0.91	□□□□□ -2.26
YPT6	YLR262C	HMLALPHA2	P0CY09	210 aa		0.91	□□□□□ -2.26
YPT6	YLR262C	SKI6	P46948	246 aa	Predicted RBP	0.91	□□□□□ -2.26
YPT6	YLR262C	YJR111C	P47148	283 aa	Known RBP	0.91	□□□□□ -2.26
YPT6	YLR262C	MMS2	P53152	137 aa		0.91	□□□□□ -2.26
YPT6	YLR262C	YLR460C	P54007	376 aa		0.91	□□□□□ -2.26
YPT6	YLR262C	DAD4	P69851	72 aa		0.91	□□□□□ -2.26
YPT6	YLR262C	YML100W-A	Q8TGT0	57 aa		0.91	□□□□□ -2.26
YPT6	YLR262C	YPK2	P18961	677 aa		0.9	□□□□□ -2.27
YPT6	YLR262C	RPB7	P34087	171 aa		0.9	□□□□□ -2.27
YPT6	YLR262C	MTW1	P39731	289 aa		0.9	□□□□□ -2.27
YPT6	YLR262C	HPA3	P39979	161 aa		0.9	□□□□□ -2.27
YPT6	YLR262C	TIM11	P81449	96 aa	Predicted RBP	0.9	□□□□□ -2.27
YPT6	YLR262C	AIM36	Q03798	255 aa		0.9	□□□□□ -2.27
YPT6	YLR262C	DYN3	Q04949	312 aa		0.9	□□□□□ -2.27
YPT6	YLR262C	ASF2	P32448	525 aa	Predicted RBP	0.89	□□□□□ -2.27
YPT6	YLR262C	UPS3	Q04006	179 aa		0.89	□□□□□ -2.27
YPT6	YLR262C	COA3	Q3E7B2	85 aa		0.89	□□□□□ -2.27
YPT6	YLR262C	FAS1	P07149	2051 aa	Known RBP	0.88	□□□□□ -2.27
YPT6	YLR262C	PHO85	P17157	305 aa		0.88	□□□□□ -2.27
YPT6	YLR262C	THG1	P53215	237 aa	Known RBP	0.88	□□□□□ -2.27
YPT6	YLR262C	YNL033W	P53964	284 aa		0.88	□□□□□ -2.27
YPT6	YLR262C	IGO2	Q9P305	131 aa		0.88	□□□□□ -2.27
YPT6	YLR262C	MGT1	P26188	188 aa		0.87	□□□□□ -2.27
YPT6	YLR262C	NOP19	P53317	196 aa	Predicted RBP	0.87	□□□□□ -2.27
YPT6	YLR262C	DIG2	Q03373	323 aa	Known RBP	0.87	□□□□□ -2.27
YPT6	YLR262C	YMR253C	Q04835	414 aa		0.87	□□□□□ -2.27
YPT6	YLR262C	NAT3	Q06504	195 aa		0.87	□□□□□ -2.27
YPT6	YLR262C	TIR1	P10863	254 aa		0.86	□□□□□ -2.27
YPT6	YLR262C	STP22	P25604	385 aa		0.86	□□□□□ -2.27
YPT6	YLR262C	ARO7	P32178	256 aa		0.86	□□□□□ -2.27
YPT6	YLR262C	CUP9	P41817	306 aa		0.86	□□□□□ -2.27
YPT6	YLR262C	YNL184C	P53876	108 aa		0.86	□□□□□ -2.27
YPT6	YLR262C	SHH3	Q04487	196 aa		0.86	□□□□□ -2.27
YPT6	YLR262C	RPB4	P20433	221 aa	Predicted RBP	0.85	□□□□□ -2.27
YPT6	YLR262C	GSP2	P32836	220 aa	Known RBP	0.85	□□□□□ -2.27
YPT6	YLR262C	YMR226C	Q05016	267 aa	Known RBP	0.85	□□□□□ -2.27
YPT6	YLR262C	YLR036C	Q07986	203 aa		0.85	□□□□□ -2.27
YPT6	YLR262C	QCR7	P00128	127 aa		0.84	□□□□□ -2.27
YPT6	YLR262C	ALB1	P47019	175 aa	Predicted RBP	0.84	□□□□□ -2.27
YPT6	YLR262C	MET31	Q03081	177 aa		0.84	□□□□□ -2.27
YPT6	YLR262C	ABP140	Q08641	628 aa	Known RBP	0.84	□□□□□ -2.27
YPT6	YLR262C	SNF4	P12904	322 aa		0.83	□□□□□ -2.28
YPT6	YLR262C	NTG1	P31378	399 aa		0.83	□□□□□ -2.28
YPT6	YLR262C	SFK1	P35735	353 aa		0.83	□□□□□ -2.28
YPT6	YLR262C	YKT6	P36015	200 aa	Known RBP	0.83	□□□□□ -2.28
YPT6	YLR262C	SPC25	P40014	221 aa		0.83	□□□□□ -2.28
YPT6	YLR262C	YFL019C	P43576	117 aa		0.83	□□□□□ -2.28
YPT6	YLR262C	UBC12	P52491	188 aa		0.83	□□□□□ -2.28
YPT6	YLR262C	SEN2	P16658	377 aa		0.82	□□□□□ -2.28
YPT6	YLR262C	GPI14	P47088	403 aa	Known RBP	0.82	□□□□□ -2.28
YPT6	YLR262C	YLR031W	Q07978	186 aa		0.82	□□□□□ -2.28
YPT6	YLR262C	PST2	Q12335	198 aa	Known RBP	0.82	□□□□□ -2.28
YPT6	YLR262C	DUR1,2	P32528	1835 aa	Known RBP	0.81	□□□□□ -2.28
YPT6	YLR262C	IDP1	P21954	428 aa	Known RBP	0.81	□□□□□ -2.28
YPT6	YLR262C	FMP23	P38231	175 aa		0.81	□□□□□ -2.28
YPT6	YLR262C	VPS71	Q03433	280 aa		0.81	□□□□□ -2.28
YPT6	YLR262C	YDR391C	Q04170	232 aa		0.81	□□□□□ -2.28
YPT6	YLR262C	FYV12	Q08559	129 aa		0.81	□□□□□ -2.28
YPT6	YLR262C	GET4	Q12125	312 aa		0.81	□□□□□ -2.28
YPT6	YLR262C	STF2	P16965	84 aa		0.8	□□□□□ -2.28
YPT6	YLR262C	MRPS17	Q03246	237 aa	Predicted RBP	0.8	□□□□□ -2.28
YPT6	YLR262C	ARO80	Q04052	950 aa		0.8	□□□□□ -2.28
YPT6	YLR262C	YLR422W	Q06409	1932 aa		0.79	□□□□□ -2.28
YPT6	YLR262C	PDS1	P40316	373 aa	Predicted RBP	0.79	□□□□□ -2.28
YPT6	YLR262C	TDA4	P47153	279 aa		0.79	□□□□□ -2.28
YPT6	YLR262C	RRP17	Q04031	235 aa	Predicted RBP	0.79	□□□□□ -2.28
YPT6	YLR262C	LCL2	Q08045	131 aa		0.79	□□□□□ -2.28
YPT6	YLR262C	ADF1	Q2V2Q1	113 aa		0.79	□□□□□ -2.28
YPT6	YLR262C	TAR1	Q8TGM6	124 aa		0.79	□□□□□ -2.28
YPT6	YLR262C	RAD9	P14737	1309 aa		0.79	□□□□□ -2.28
YPT6	YLR262C	MRPL15	P36523	253 aa		0.78	□□□□□ -2.28
YPT6	YLR262C	YFL051C	P43552	160 aa		0.78	□□□□□ -2.28
YPT6	YLR262C	SBH1	P52870	82 aa		0.78	□□□□□ -2.28
YPT6	YLR262C	PIR1	Q03178	341 aa		0.78	□□□□□ -2.28
YPT6	YLR262C	YOL024W	Q08172	172 aa		0.78	□□□□□ -2.28
YPT6	YLR262C	YCR023C	P25351	611 aa		0.77	□□□□□ -2.29
YPT6	YLR262C	AHT1	P29589	182 aa		0.77	□□□□□ -2.29
YPT6	YLR262C	TMA22	P47089	198 aa	Predicted RBP	0.77	□□□□□ -2.29
YPT6	YLR262C	TRX3	P25372	127 aa		0.76	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms