RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	SEN2	P16658	377 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	STE18	P18852	110 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	FPR1	P20081	114 aa	Known RBP	1.09	□□□□□ -2.24
SMC4	YLR086W	ERG28	P40030	148 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	YGR201C	P42936	225 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	EAF6	P47128	113 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	NUP57	P48837	541 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	YGL088W	P53151	121 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	MAL12	P53341	584 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	SNZ1	Q03148	297 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	FMN1	Q03778	218 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	TRM12	Q04235	462 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	EMI1	Q04406	187 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	VPS68	Q12016	184 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	YLR053C	Q12026	108 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	YOR020W-A	Q3E824	90 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	RIB3	Q99258	208 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	IPP1	P00817	287 aa	Known RBP	1.09	□□□□□ -2.24
SMC4	YLR086W	RPS20	P38701	121 aa	Known RBP	1.09	□□□□□ -2.24
SMC4	YLR086W	IKI1	P38874	309 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	PFS2	P42841	465 aa	Known RBP	1.09	□□□□□ -2.24
SMC4	YLR086W	CAB4	P53332	305 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	YDR249C	Q03787	373 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	UIP4	Q08926	304 aa		1.09	□□□□□ -2.24
SMC4	YLR086W	Q0255	P03881	472 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	COX9	P07255	59 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	RNP1	P32385	249 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	SEC17	P32602	292 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	MAL32	P38158	584 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	IRC22	P40006	225 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	RFC4	P40339	323 aa	Known RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	YIL012W	P40551	113 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	PRM8	P53174	237 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	PDR17	P53844	350 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	ALG9	P53868	555 aa	Known RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	AIM36	Q03798	255 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	THI74	Q04083	370 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	NOP1	P15646	327 aa	Known RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	URA6	P15700	204 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	TAH1	P25638	111 aa	Predicted RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	UBC8	P28263	218 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	PRP18	P33411	251 aa	Predicted RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	VMA22	P38784	181 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	YHR138C	P38841	114 aa	Predicted RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	ORM1	P53224	222 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	YNR062C	P53748	327 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	GRH1	Q04410	372 aa	Known RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	YMR315W	Q04869	349 aa	Known RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	BRX1	Q08235	291 aa	Known RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	YBL008W-A	Q3E821	79 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	SUA7	P29055	345 aa	Predicted RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	PTM1	P32857	523 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	YBL081W	P38180	368 aa	Known RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	FCY21	P40039	528 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	YMR144W	P40214	342 aa	Known RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	ECO1	P43605	281 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	GEP7	P53171	287 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	NRK1	P53915	240 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	APJ1	P53940	528 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	USB1	Q12208	290 aa	Known RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	JLP1	Q12358	412 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	GEP5	Q12393	293 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	PSF1	Q12488	208 aa		1.08	□□□□□ -2.24
SMC4	YLR086W	MDN1	Q12019	4910 aa	Known RBP	1.08	□□□□□ -2.24
SMC4	YLR086W	ADH3	P07246	375 aa	Known RBP	1.07	□□□□□ -2.24
SMC4	YLR086W	ARG80	P07249	177 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	RPS23A	P0CX29	145 aa	Known RBP	1.07	□□□□□ -2.24
SMC4	YLR086W	RPS23B	P0CX30	145 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	GRX2	P17695	143 aa	Known RBP	1.07	□□□□□ -2.24
SMC4	YLR086W	YPK2	P18961	677 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	SEC59	P20048	519 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	PEX34	P25584	144 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	1.07	□□□□□ -2.24	not detected
SMC4	YLR086W	ETR1	P38071	380 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	ECM33	P38248	429 aa	Known RBP	1.07	□□□□□ -2.24
SMC4	YLR086W	SSH1	P38353	490 aa	Known RBP	1.07	□□□□□ -2.24
SMC4	YLR086W	MED6	P38782	295 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	DLS1	P40366	167 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	ERG10	P41338	398 aa	Known RBP	1.07	□□□□□ -2.24
SMC4	YLR086W	SMD3	P43321	101 aa	Known RBP	1.07	□□□□□ -2.24
SMC4	YLR086W	GNA1	P43577	159 aa	Predicted RBP	1.07	□□□□□ -2.24
SMC4	YLR086W	MNN5	P46982	586 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	ERG25	P53045	309 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	YLR179C	Q06252	201 aa	Known RBP	1.07	□□□□□ -2.24
SMC4	YLR086W	RFU1	Q08003	200 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	YOL131W	Q08270	108 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	OCA6	Q12454	224 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	HTL1	Q9URQ5	78 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	MOT1	P32333	1867 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	RPL9A	P05738	191 aa	Known RBP	1.07	□□□□□ -2.24
SMC4	YLR086W	GCN3	P14741	305 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	SEC22	P22214	214 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	CTR2	P38865	189 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	HPM1	P40481	377 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	ARC15	P40518	154 aa	RIP-Chip data	1.07	□□□□□ -2.24	not detected
SMC4	YLR086W	YIL059C	P40520	121 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	SER2	P42941	309 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	RPL9B	P51401	191 aa	Known RBP	1.07	□□□□□ -2.24
SMC4	YLR086W	YGL159W	P53110	370 aa		1.07	□□□□□ -2.24
SMC4	YLR086W	YGR026W	P53217	278 aa		1.07	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 27 ms