RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	FYV6	P53913	173 aa		5.12	□□□□□ -1.59
TIF1	YKR059W	CTF19	Q02732	369 aa		5.12	□□□□□ -1.59
TIF1	YKR059W	ADD37	Q03233	198 aa		5.12	□□□□□ -1.59
TIF1	YKR059W	YOR292C	Q08743	309 aa		5.12	□□□□□ -1.59
TIF1	YKR059W	RFM1	Q12192	310 aa		5.12	□□□□□ -1.59
TIF1	YKR059W	RPL21B	Q12672	160 aa	Known RBP	5.12	□□□□□ -1.59
TIF1	YKR059W	FBA1	P14540	359 aa	Known RBP	5.11	□□□□□ -1.59
TIF1	YKR059W	SNF6	P18888	332 aa		5.11	□□□□□ -1.59
TIF1	YKR059W	RFA3	P26755	122 aa	Known RBP	5.11	□□□□□ -1.59
TIF1	YKR059W	VPH2	P32341	215 aa		5.11	□□□□□ -1.59
TIF1	YKR059W	GDH2	P33327	1092 aa	Known RBP	5.11	□□□□□ -1.59
TIF1	YKR059W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.11	□□□□□ -1.59	not detected
TIF1	YKR059W	BNS1	P50084	137 aa		5.11	□□□□□ -1.59
TIF1	YKR059W	YKL068W-A	Q3E826	78 aa		5.11	□□□□□ -1.59
TIF1	YKR059W	MHF2	Q3E829	80 aa		5.11	□□□□□ -1.59
TIF1	YKR059W	QCR7	P00128	127 aa		5.1	□□□□□ -1.59
TIF1	YKR059W	TPI1	P00942	248 aa	Known RBP	5.1	□□□□□ -1.59
TIF1	YKR059W	VMA11	P32842	164 aa		5.1	□□□□□ -1.59
TIF1	YKR059W	OXA1	P39952	402 aa		5.1	□□□□□ -1.59
TIF1	YKR059W	MGA1	P53050	456 aa		5.1	□□□□□ -1.59
TIF1	YKR059W	SYF2	P53277	215 aa	Predicted RBP	5.1	□□□□□ -1.59
TIF1	YKR059W	DML1	Q03652	475 aa		5.1	□□□□□ -1.59
TIF1	YKR059W	YDR102C	Q03864	110 aa		5.1	□□□□□ -1.59
TIF1	YKR059W	RIM9	Q04734	239 aa		5.1	□□□□□ -1.59
TIF1	YKR059W	YLR126C	Q12288	251 aa		5.1	□□□□□ -1.59
TIF1	YKR059W	YER078W-A	Q3E7A2	54 aa		5.1	□□□□□ -1.59
TIF1	YKR059W	YOL162W	P0CF19	215 aa		5.09	□□□□□ -1.59
TIF1	YKR059W	PET9	P18239	318 aa	Known RBP	5.09	□□□□□ -1.59
TIF1	YKR059W	IMP1	P28627	190 aa		5.09	□□□□□ -1.59
TIF1	YKR059W	CLG1	P35190	452 aa		5.09	□□□□□ -1.59
TIF1	YKR059W	PRY2	P36110	329 aa		5.09	□□□□□ -1.59
TIF1	YKR059W	MIG2	P53035	382 aa		5.09	□□□□□ -1.59
TIF1	YKR059W	YGL101W	P53144	215 aa		5.09	□□□□□ -1.59
TIF1	YKR059W	SLX9	P53251	210 aa	Predicted RBP	5.09	□□□□□ -1.59
TIF1	YKR059W	YNL033W	P53964	284 aa		5.09	□□□□□ -1.59
TIF1	YKR059W	YNL019C	P53975	284 aa		5.09	□□□□□ -1.59
TIF1	YKR059W	YMR317W	Q04893	1140 aa		5.09	□□□□□ -1.59
TIF1	YKR059W	CSI2	Q08054	341 aa		5.09	□□□□□ -1.59
TIF1	YKR059W	MRPL3	P36516	390 aa		5.08	□□□□□ -1.6
TIF1	YKR059W	GPI18	P38211	433 aa		5.08	□□□□□ -1.6
TIF1	YKR059W	HPM1	P40481	377 aa		5.08	□□□□□ -1.6
TIF1	YKR059W	PFS2	P42841	465 aa	Known RBP	5.08	□□□□□ -1.6
TIF1	YKR059W	IRC18	P47056	224 aa		5.08	□□□□□ -1.6
TIF1	YKR059W	YJL016W	P47072	561 aa		5.08	□□□□□ -1.6
TIF1	YKR059W	NIF3	P53081	288 aa		5.08	□□□□□ -1.6
TIF1	YKR059W	SPG4	Q04438	115 aa		5.08	□□□□□ -1.6
TIF1	YKR059W	PIN3	Q06449	215 aa		5.08	□□□□□ -1.6
TIF1	YKR059W	HRT1	Q08273	121 aa		5.08	□□□□□ -1.6
TIF1	YKR059W	MSW1	P04803	379 aa		5.07	□□□□□ -1.6
TIF1	YKR059W	YAK1	P14680	807 aa		5.07	□□□□□ -1.6
TIF1	YKR059W	NTF2	P33331	125 aa	Known RBP	5.07	□□□□□ -1.6
TIF1	YKR059W	BRR6	P53062	197 aa		5.07	□□□□□ -1.6
TIF1	YKR059W	GEP7	P53171	287 aa		5.07	□□□□□ -1.6
TIF1	YKR059W	ALG13	P53178	202 aa		5.07	□□□□□ -1.6
TIF1	YKR059W	ERV2	Q12284	196 aa		5.07	□□□□□ -1.6
TIF1	YKR059W	CDC50	P25656	391 aa		5.06	□□□□□ -1.6
TIF1	YKR059W	SHE1	P38200	338 aa		5.06	□□□□□ -1.6
TIF1	YKR059W	MBA1	P38300	278 aa		5.06	□□□□□ -1.6
TIF1	YKR059W	GOS1	P38736	223 aa		5.06	□□□□□ -1.6
TIF1	YKR059W	BMT5	P40493	336 aa		5.06	□□□□□ -1.6
TIF1	YKR059W	YDR115W	Q04598	105 aa		5.06	□□□□□ -1.6
TIF1	YKR059W	LIP2	Q06005	328 aa		5.06	□□□□□ -1.6
TIF1	YKR059W	DXO1	Q06349	442 aa		5.06	□□□□□ -1.6
TIF1	YKR059W	GPI11	Q06636	219 aa		5.06	□□□□□ -1.6
TIF1	YKR059W	PRP11	Q07350	266 aa	Predicted RBP	5.06	□□□□□ -1.6
TIF1	YKR059W	YCL048W-A	Q2V2Q2	79 aa		5.06	□□□□□ -1.6
TIF1	YKR059W	YKL075C	P36083	450 aa		5.05	□□□□□ -1.6
TIF1	YKR059W	SKG1	P36169	355 aa		5.05	□□□□□ -1.6
TIF1	YKR059W	FRM2	P37261	193 aa		5.05	□□□□□ -1.6
TIF1	YKR059W	MCM22	P47167	239 aa		5.05	□□□□□ -1.6
TIF1	YKR059W	YGL159W	P53110	370 aa		5.05	□□□□□ -1.6
TIF1	YKR059W	SSU72	P53538	206 aa	Predicted RBP	5.05	□□□□□ -1.6
TIF1	YKR059W	YNR064C	P53750	290 aa		5.05	□□□□□ -1.6
TIF1	YKR059W	YLR152C	P54072	576 aa		5.05	□□□□□ -1.6
TIF1	YKR059W	RPL21A	Q02753	160 aa	Known RBP	5.05	□□□□□ -1.6
TIF1	YKR059W	YDC1	Q02896	317 aa		5.05	□□□□□ -1.6
TIF1	YKR059W	PEX12	Q04370	399 aa		5.05	□□□□□ -1.6
TIF1	YKR059W	DSF1	P0CX08	502 aa		5.04	□□□□□ -1.6
TIF1	YKR059W	YNR073C	P0CX09	502 aa		5.04	□□□□□ -1.6
TIF1	YKR059W	DPB2	P24482	689 aa	Predicted RBP	5.04	□□□□□ -1.6
TIF1	YKR059W	TCA17	P32613	152 aa		5.04	□□□□□ -1.6
TIF1	YKR059W	MRX11	Q03079	207 aa		5.04	□□□□□ -1.6
TIF1	YKR059W	YMR166C	Q03829	368 aa		5.04	□□□□□ -1.6
TIF1	YKR059W	TIM9	O74700	87 aa		5.03	□□□□□ -1.6
TIF1	YKR059W	URA6	P15700	204 aa		5.03	□□□□□ -1.6
TIF1	YKR059W	YOX1	P34161	385 aa		5.03	□□□□□ -1.6
TIF1	YKR059W	FMP48	P53233	369 aa		5.03	□□□□□ -1.6
TIF1	YKR059W	DIG2	Q03373	323 aa	Known RBP	5.03	□□□□□ -1.6
TIF1	YKR059W	AIM36	Q03798	255 aa		5.03	□□□□□ -1.6
TIF1	YKR059W	SYC1	Q08553	188 aa	Predicted RBP	5.03	□□□□□ -1.6
TIF1	YKR059W	UIP4	Q08926	304 aa		5.03	□□□□□ -1.6
TIF1	YKR059W	SPC3	Q12133	184 aa		5.03	□□□□□ -1.6
TIF1	YKR059W	RAX2	Q12465	1220 aa		5.03	□□□□□ -1.6
TIF1	YKR059W	YBR298C-A	Q8TGK4	73 aa		5.03	□□□□□ -1.6
TIF1	YKR059W	SRP102	P36057	244 aa	Predicted RBP	5.02	□□□□□ -1.61
TIF1	YKR059W	SHG1	P38337	142 aa		5.02	□□□□□ -1.61
TIF1	YKR059W	MMS2	P53152	137 aa		5.02	□□□□□ -1.61
TIF1	YKR059W	HHT1	P61830	136 aa		5.02	□□□□□ -1.61
TIF1	YKR059W	UTP15	Q04305	513 aa	Known RBP	5.02	□□□□□ -1.61
TIF1	YKR059W	YGR035W-A	Q45U48	73 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms