RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W HHT1P61830 136 aa1.87□□□□□ -2.11
SNU114YKL173W YPL278CQ08990 100 aa1.87□□□□□ -2.11
SNU114YKL173W SLO1Q3E784 85 aa1.87□□□□□ -2.11
SNU114YKL173W ROM2P51862 1356 aaKnown RBP1.86□□□□□ -2.11
SNU114YKL173W CMD1P06787 147 aaKnown RBP1.86□□□□□ -2.11
SNU114YKL173W PHO13P19881 312 aa1.86□□□□□ -2.11
SNU114YKL173W SEC14P24280 304 aaKnown RBP1.86□□□□□ -2.11
SNU114YKL173W YHR127WP38833 243 aaKnown RBP1.86□□□□□ -2.11
SNU114YKL173W GLR1P41921 483 aaKnown RBP1.86□□□□□ -2.11
SNU114YKL173W ARO8P53090 500 aaKnown RBP1.86□□□□□ -2.11
SNU114YKL173W HST4P53688 370 aa1.86□□□□□ -2.11
SNU114YKL173W SLM2P53955 656 aa1.86□□□□□ -2.11
SNU114YKL173W YNL046WP53956 172 aa1.86□□□□□ -2.11
SNU114YKL173W RHO3Q00245 231 aaKnown RBP1.86□□□□□ -2.11
SNU114YKL173W APS2Q00381 147 aa1.86□□□□□ -2.11
SNU114YKL173W MRX11Q03079 207 aa1.86□□□□□ -2.11
SNU114YKL173W NHP10Q03435 203 aa1.86□□□□□ -2.11
SNU114YKL173W CGI121Q03705 181 aaKnown RBP1.86□□□□□ -2.11
SNU114YKL173W FMN1Q03778 218 aa1.86□□□□□ -2.11
SNU114YKL173W SDH7Q04401 133 aa1.86□□□□□ -2.11
SNU114YKL173W SPG4Q04438 115 aa1.86□□□□□ -2.11
SNU114YKL173W PRP11Q07350 266 aaPredicted RBP1.86□□□□□ -2.11
SNU114YKL173W HEM25Q07534 307 aa1.86□□□□□ -2.11
SNU114YKL173W YLR030WQ07967 263 aa1.86□□□□□ -2.11
SNU114YKL173W SNU23Q12368 194 aaPredicted RBP1.86□□□□□ -2.11
SNU114YKL173W PSF1Q12488 208 aa1.86□□□□□ -2.11
SNU114YKL173W YDL085C-AQ3E7B7 68 aaKnown RBP1.86□□□□□ -2.11
SNU114YKL173W MRPL24P36525 258 aaPredicted RBP1.86□□□□□ -2.11
SNU114YKL173W MRP21P38175 177 aa1.86□□□□□ -2.11
SNU114YKL173W GLE2P40066 365 aa1.86□□□□□ -2.11
SNU114YKL173W YKR005CQ02203 525 aa1.86□□□□□ -2.11
SNU114YKL173W VHS1Q03785 461 aa1.86□□□□□ -2.11
SNU114YKL173W CNL1Q06333 122 aa1.86□□□□□ -2.11
SNU114YKL173W MCH1Q07376 486 aa1.86□□□□□ -2.11
SNU114YKL173W IRC25Q07951 179 aa1.86□□□□□ -2.11
SNU114YKL173W YOR186WQ08560 144 aa1.86□□□□□ -2.11
SNU114YKL173W RRS1Q08746 203 aaKnown RBP1.86□□□□□ -2.11
SNU114YKL173W FSF1Q12029 327 aaKnown RBP1.86□□□□□ -2.11
SNU114YKL173W MDM32Q12171 622 aa1.86□□□□□ -2.11
SNU114YKL173W MHT1Q12525 324 aa1.86□□□□□ -2.11
SNU114YKL173W TY4B-HP0C2J7 1802 aa1.86□□□□□ -2.11
SNU114YKL173W RPL25P04456 142 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W YGL041W-AP0C5N3 154 aa1.85□□□□□ -2.11
SNU114YKL173W DDI2P0CH63 225 aa1.85□□□□□ -2.11
SNU114YKL173W DDI3P0CH64 225 aa1.85□□□□□ -2.11
SNU114YKL173W BGL2P15703 313 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W OAC1P32332 324 aa1.85□□□□□ -2.11
SNU114YKL173W OM14P38325 134 aa1.85□□□□□ -2.11
SNU114YKL173W YHL026CP38740 315 aa1.85□□□□□ -2.11
SNU114YKL173W DOG2P38773 246 aa1.85□□□□□ -2.11
SNU114YKL173W DOG1P38774 246 aa1.85□□□□□ -2.11
SNU114YKL173W COG7P53195 279 aa1.85□□□□□ -2.11
SNU114YKL173W INP1Q03694 420 aa1.85□□□□□ -2.11
SNU114YKL173W HPT1Q04178 221 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W API2Q04413 109 aa1.85□□□□□ -2.11
SNU114YKL173W MRX8Q05473 314 aa1.85□□□□□ -2.11
SNU114YKL173W YLR179CQ06252 201 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W FCF2Q12035 217 aaPredicted RBP1.85□□□□□ -2.11
SNU114YKL173W IRA2P19158 3079 aa1.85□□□□□ -2.11
SNU114YKL173W ADH1P00330 348 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W CNB1P25296 175 aa1.85□□□□□ -2.11
SNU114YKL173W BUB2P26448 306 aaPredicted RBP1.85□□□□□ -2.11
SNU114YKL173W RPC19P28000 142 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W ARO2P28777 376 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W PAN3P36102 679 aaPredicted RBP1.85□□□□□ -2.11
SNU114YKL173W YBR063CP38083 404 aa1.85□□□□□ -2.11
SNU114YKL173W YBL081WP38180 368 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W ARN2P38724 620 aa1.85□□□□□ -2.11
SNU114YKL173W YEA4P40004 342 aa1.85□□□□□ -2.11
SNU114YKL173W APQ12P40532 138 aa1.85□□□□□ -2.11
SNU114YKL173W YAE1P47118 141 aaPredicted RBP1.85□□□□□ -2.11
SNU114YKL173W SOL1P50278 321 aa1.85□□□□□ -2.11
SNU114YKL173W YGL101WP53144 215 aa1.85□□□□□ -2.11
SNU114YKL173W MRH4P53166 561 aa1.85□□□□□ -2.11
SNU114YKL173W YDR115WQ04598 105 aa1.85□□□□□ -2.11
SNU114YKL173W ATG5Q12380 294 aa1.85□□□□□ -2.11
SNU114YKL173W PEX11Q12462 236 aa1.85□□□□□ -2.11
SNU114YKL173W YIR021W-AQ3E739 70 aa1.85□□□□□ -2.11
SNU114YKL173W IPP1P00817 287 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W ERG24P32462 438 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W SHE2P36068 246 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
SNU114YKL173W MRPL27P36526 146 aaPredicted RBP1.85□□□□□ -2.11
SNU114YKL173W SOL2P37262 315 aa1.85□□□□□ -2.11
SNU114YKL173W PEX17P40155 199 aa1.85□□□□□ -2.11
SNU114YKL173W XPT1P47165 209 aa1.85□□□□□ -2.11
SNU114YKL173W RPS12P48589 143 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W YGR018CP53211 109 aa1.85□□□□□ -2.11
SNU114YKL173W AAH1P53909 347 aa1.85□□□□□ -2.11
SNU114YKL173W COF1Q03048 143 aaKnown RBP1.85□□□□□ -2.11
SNU114YKL173W MAK3Q03503 176 aa1.85□□□□□ -2.11
SNU114YKL173W TMA23Q03525 211 aa1.85□□□□□ -2.11
SNU114YKL173W LIP2Q06005 328 aa1.85□□□□□ -2.11
SNU114YKL173W RRG7Q08774 242 aaPredicted RBP1.85□□□□□ -2.11
SNU114YKL173W YOR342CQ12182 319 aa1.85□□□□□ -2.11
SNU114YKL173W LYS2P07702 1392 aa1.84□□□□□ -2.11
SNU114YKL173W PTC1P35182 281 aa1.84□□□□□ -2.11
SNU114YKL173W PRY2P36110 329 aa1.84□□□□□ -2.11
SNU114YKL173W RPS20P38701 121 aaKnown RBP1.84□□□□□ -2.11
SNU114YKL173W YJR015WP47090 510 aa1.84□□□□□ -2.11
SNU114YKL173W BXI1P48558 297 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms