RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W TOR2P32600 2474 aaKnown RBP1.24□□□□□ -2.21
PEP8YJL053W IKI3Q06706 1349 aaKnown RBP1.23□□□□□ -2.21
PEP8YJL053W GPA2P10823 449 aa1.23□□□□□ -2.21
PEP8YJL053W RPB3P16370 318 aaKnown RBP1.23□□□□□ -2.21
PEP8YJL053W FPR1P20081 114 aaKnown RBP1.23□□□□□ -2.21
PEP8YJL053W TAF14P35189 244 aa1.23□□□□□ -2.21
PEP8YJL053W YKT6P36015 200 aaKnown RBP1.23□□□□□ -2.21
PEP8YJL053W MRPS17Q03246 237 aaPredicted RBP1.23□□□□□ -2.21
PEP8YJL053W CSI2Q08054 341 aa1.23□□□□□ -2.21
PEP8YJL053W HAP1P0CE41 1502 aa1.22□□□□□ -2.21
PEP8YJL053W TY3B-GQ99315 1547 aa1.22□□□□□ -2.21
PEP8YJL053W CDC36P06100 191 aaPredicted RBP1.22□□□□□ -2.21
PEP8YJL053W RFA3P26755 122 aaKnown RBP1.22□□□□□ -2.21
PEP8YJL053W TVP38P36164 337 aa1.22□□□□□ -2.21
PEP8YJL053W GET1P53192 235 aa1.22□□□□□ -2.21
PEP8YJL053W CUS2P53830 285 aaPredicted RBP1.22□□□□□ -2.21
PEP8YJL053W YDR274CP87283 123 aa1.22□□□□□ -2.21
PEP8YJL053W FUS2Q05670 677 aa1.22□□□□□ -2.21
PEP8YJL053W RIO1Q12196 484 aaKnown RBP1.22□□□□□ -2.21
PEP8YJL053W YDL180WQ12301 547 aa1.22□□□□□ -2.21
PEP8YJL053W YFR032C-BQ8TGU2 87 aa1.22□□□□□ -2.21
PEP8YJL053W GEA1P47102 1408 aaPredicted RBP1.22□□□□□ -2.21
PEP8YJL053W SIR2P06700 562 aa1.21□□□□□ -2.22
PEP8YJL053W CBF1P17106 351 aa1.21□□□□□ -2.22
PEP8YJL053W ECM4P36156 370 aa1.21□□□□□ -2.22
PEP8YJL053W AIM2P39721 246 aa1.21□□□□□ -2.22
PEP8YJL053W GLE2P40066 365 aa1.21□□□□□ -2.22
PEP8YJL053W AIM25P47140 327 aa1.21□□□□□ -2.22
PEP8YJL053W PET191Q02772 108 aa1.21□□□□□ -2.22
PEP8YJL053W CUE4Q04201 117 aaPredicted RBP1.21□□□□□ -2.22
PEP8YJL053W HNT1Q04344 158 aaKnown RBP1.21□□□□□ -2.22
PEP8YJL053W GET4Q12125 312 aa1.21□□□□□ -2.22
PEP8YJL053W ULS1Q08562 1619 aa1.21□□□□□ -2.22
PEP8YJL053W SRB8P25648 1427 aa1.21□□□□□ -2.22
PEP8YJL053W YSP2Q06681 1438 aa1.21□□□□□ -2.22
PEP8YJL053W YLR236CA0A023PZG4 107 aa1.2□□□□□ -2.22
PEP8YJL053W QCR8P08525 94 aa1.2□□□□□ -2.22
PEP8YJL053W RPL2AP0CX45 254 aaKnown RBP1.2□□□□□ -2.22
PEP8YJL053W RPL2BP0CX46 254 aaKnown RBP1.2□□□□□ -2.22
PEP8YJL053W MATALPHA2P0CY08 210 aa1.2□□□□□ -2.22
PEP8YJL053W HMLALPHA2P0CY09 210 aa1.2□□□□□ -2.22
PEP8YJL053W ATP15P21306 62 aa1.2□□□□□ -2.22
PEP8YJL053W YCR090CP25654 182 aaKnown RBP1.2□□□□□ -2.22
PEP8YJL053W UPS2P35200 230 aa1.2□□□□□ -2.22
PEP8YJL053W KNH1P50112 268 aa1.2□□□□□ -2.22
PEP8YJL053W MMS2P53152 137 aa1.2□□□□□ -2.22
PEP8YJL053W POP3P53833 195 aaPredicted RBP1.2□□□□□ -2.22
PEP8YJL053W YOL160WQ08321 113 aa1.2□□□□□ -2.22
PEP8YJL053W YNG1Q08465 219 aa1.2□□□□□ -2.22
PEP8YJL053W ADF1Q2V2Q1 113 aa1.2□□□□□ -2.22
PEP8YJL053W ODC2Q99297 307 aa1.2□□□□□ -2.22
PEP8YJL053W ARO1P08566 1588 aaKnown RBP1.19□□□□□ -2.22
PEP8YJL053W KDX1P36005 433 aa1.19□□□□□ -2.22
PEP8YJL053W NUP49Q02199 472 aa1.19□□□□□ -2.22
PEP8YJL053W UBR2Q07963 1872 aa1.19□□□□□ -2.22
PEP8YJL053W ABP140Q08641 628 aaKnown RBP1.19□□□□□ -2.22
PEP8YJL053W SPO14P36126 1683 aa1.19□□□□□ -2.22
PEP8YJL053W DOP1Q03921 1698 aa1.19□□□□□ -2.22
PEP8YJL053W TY2B-LR1P0C2J3 1770 aa1.19□□□□□ -2.22
PEP8YJL053W TY2B-FP0CX63 1770 aa1.19□□□□□ -2.22
PEP8YJL053W TY2B-GR2P0CX64 1770 aa1.19□□□□□ -2.22
PEP8YJL053W TY2B-CP25384 1770 aa1.19□□□□□ -2.22
PEP8YJL053W TY2B-DR2Q03494 1770 aa1.19□□□□□ -2.22
PEP8YJL053W TY1B-DR1Q03855 1755 aa1.19□□□□□ -2.22
PEP8YJL053W TY2B-DR3Q07791 1770 aaKnown RBP1.19□□□□□ -2.22
PEP8YJL053W TY2B-OR1Q12113 1770 aa1.19□□□□□ -2.22
PEP8YJL053W TY1B-BRQ12193 1756 aa1.19□□□□□ -2.22
PEP8YJL053W TY1B-GR3Q12316 1755 aa1.19□□□□□ -2.22
PEP8YJL053W TY2B-DR1Q12472 1770 aa1.19□□□□□ -2.22
PEP8YJL053W TY2B-OR2Q12501 1770 aa1.19□□□□□ -2.22
PEP8YJL053W TY1B-ORQ92393 1755 aa1.19□□□□□ -2.22
PEP8YJL053W RPO21P04050 1733 aaKnown RBP1.18□□□□□ -2.22
PEP8YJL053W CPA1P07258 411 aaKnown RBP1.18□□□□□ -2.22
PEP8YJL053W RPL27AP0C2H6 136 aaKnown RBP1.18□□□□□ -2.22
PEP8YJL053W YPK2P18961 677 aa1.18□□□□□ -2.22
PEP8YJL053W OCH1P31755 480 aa1.18□□□□□ -2.22
PEP8YJL053W PAN3P36102 679 aaPredicted RBP1.18□□□□□ -2.22
PEP8YJL053W OPY1P38271 328 aa1.18□□□□□ -2.22
PEP8YJL053W DYN3Q04949 312 aa1.18□□□□□ -2.22
PEP8YJL053W GGA1Q06336 557 aa1.18□□□□□ -2.22
PEP8YJL053W TY1B-HO13535 1793 aa1.18□□□□□ -2.22
PEP8YJL053W TY1B-DR5P0C2I2 1755 aa1.18□□□□□ -2.22
PEP8YJL053W TY1B-DR6P0C2I3 1755 aa1.18□□□□□ -2.22
PEP8YJL053W TY1B-LR2P0C2I5 1755 aa1.18□□□□□ -2.22
PEP8YJL053W TY1B-LR3P0C2I6 1755 aaKnown RBP1.18□□□□□ -2.22
PEP8YJL053W TY1B-PR1P0C2I9 1755 aaKnown RBP1.18□□□□□ -2.22
PEP8YJL053W TY1B-PR2P0C2J0 1756 aa1.18□□□□□ -2.22
PEP8YJL053W TY1B-PR3P0C2J1 1755 aaKnown RBP1.18□□□□□ -2.22
PEP8YJL053W TY1B-JR1P47098 1755 aa1.18□□□□□ -2.22
PEP8YJL053W TY1B-ML2Q03434 1755 aaKnown RBP1.18□□□□□ -2.22
PEP8YJL053W TY1B-ER1Q03612 1755 aa1.18□□□□□ -2.22
PEP8YJL053W TY1B-ML1Q04711 1755 aaKnown RBP1.18□□□□□ -2.22
PEP8YJL053W TY1B-GR2Q12269 1755 aa1.18□□□□□ -2.22
PEP8YJL053W TY1B-OLQ12273 1755 aa1.18□□□□□ -2.22
PEP8YJL053W TY1B-PLQ12414 1755 aaKnown RBP1.18□□□□□ -2.22
PEP8YJL053W MLP2P40457 1679 aa1.17□□□□□ -2.22
PEP8YJL053W TY2B-BQ12491 1770 aa1.17□□□□□ -2.22
PEP8YJL053W MBF1O14467 151 aaKnown RBP1.17□□□□□ -2.22
PEP8YJL053W MRS1P07266 363 aa1.17□□□□□ -2.22
PEP8YJL053W SEC11P15367 167 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms