RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W YDR034W-BQ6Q5X2 51 aa5.17□□□□□ -1.58
SNU71YGR013W YHR213W-AQ8TGT4 77 aa5.17□□□□□ -1.58
SNU71YGR013W RAD10P06838 210 aa5.17□□□□□ -1.58
SNU71YGR013W NHP6AP11632 93 aaKnown RBP5.17□□□□□ -1.58
SNU71YGR013W CAT5P41735 233 aa5.17□□□□□ -1.58
SNU71YGR013W UBC12P52491 188 aa5.17□□□□□ -1.58
SNU71YGR013W NQM1P53228 333 aaPredicted RBP5.17□□□□□ -1.58
SNU71YGR013W LSM7P53905 115 aaKnown RBP5.17□□□□□ -1.58
SNU71YGR013W YOL160WQ08321 113 aa5.17□□□□□ -1.58
SNU71YGR013W YPS3Q12303 508 aa5.17□□□□□ -1.58
SNU71YGR013W WIP1Q2V2P8 89 aa5.17□□□□□ -1.58
SNU71YGR013W PET54P10834 293 aa5.16□□□□□ -1.58
SNU71YGR013W ARO7P32178 256 aa5.16□□□□□ -1.58
SNU71YGR013W YGL262WP53054 175 aa5.16□□□□□ -1.58
SNU71YGR013W YNL184CP53876 108 aa5.16□□□□□ -1.58
SNU71YGR013W EMI1Q04406 187 aa5.16□□□□□ -1.58
SNU71YGR013W YOL029CQ08187 201 aa5.16□□□□□ -1.58
SNU71YGR013W MDM32Q12171 622 aa5.16□□□□□ -1.58
SNU71YGR013W ATG5Q12380 294 aa5.16□□□□□ -1.58
SNU71YGR013W LHP1P33399 275 aaKnown RBP5.15□□□□□ -1.58
SNU71YGR013W SMP1P38128 452 aa5.15□□□□□ -1.58
SNU71YGR013W CYC2P38909 366 aa5.15□□□□□ -1.58
SNU71YGR013W YPL039WQ03080 316 aa5.15□□□□□ -1.58
SNU71YGR013W LDB18Q07887 179 aa5.15□□□□□ -1.58
SNU71YGR013W FEX2Q08991 375 aa5.15□□□□□ -1.58
SNU71YGR013W TIM22Q12328 207 aa5.15□□□□□ -1.58
SNU71YGR013W YHR214C-EQ8TGK0 99 aa5.15□□□□□ -1.58
SNU71YGR013W TOR2P32600 2474 aaKnown RBP5.15□□□□□ -1.59
SNU71YGR013W YNR062CP53748 327 aa5.15□□□□□ -1.59
SNU71YGR013W TIM8P57744 87 aa5.15□□□□□ -1.59
SNU71YGR013W ECM19Q06011 112 aa5.15□□□□□ -1.59
SNU71YGR013W YLR179CQ06252 201 aaKnown RBP5.15□□□□□ -1.59
SNU71YGR013W YLR053CQ12026 108 aa5.15□□□□□ -1.59
SNU71YGR013W TVP38P36164 337 aa5.14□□□□□ -1.59
SNU71YGR013W HMF1P40037 129 aaKnown RBP5.14□□□□□ -1.59
SNU71YGR013W YGL118CP53132 145 aa5.14□□□□□ -1.59
SNU71YGR013W SAE3P89114 91 aa5.14□□□□□ -1.59
SNU71YGR013W YMR317WQ04893 1140 aa5.14□□□□□ -1.59
SNU71YGR013W YPR063CQ12160 140 aa5.14□□□□□ -1.59
SNU71YGR013W YOR214CQ12282 236 aa5.14□□□□□ -1.59
SNU71YGR013W RDI1Q12434 202 aa5.14□□□□□ -1.59
SNU71YGR013W DFM1Q12743 341 aaKnown RBP5.14□□□□□ -1.59
SNU71YGR013W PRE7P23724 241 aaKnown RBP5.13□□□□□ -1.59
SNU71YGR013W YCR090CP25654 182 aaKnown RBP5.13□□□□□ -1.59
SNU71YGR013W YBL081WP38180 368 aaKnown RBP5.13□□□□□ -1.59
SNU71YGR013W DOG1P38774 246 aa5.13□□□□□ -1.59
SNU71YGR013W SYS1P41544 203 aa5.13□□□□□ -1.59
SNU71YGR013W PRM10P42946 383 aa5.13□□□□□ -1.59
SNU71YGR013W YJL028WP47062 111 aa5.13□□□□□ -1.59
SNU71YGR013W PRM8P53174 237 aa5.13□□□□□ -1.59
SNU71YGR013W YGR017WP53210 297 aa5.13□□□□□ -1.59
SNU71YGR013W EFG1Q3E705 233 aaKnown RBP5.13□□□□□ -1.59
SNU71YGR013W PTM1P32857 523 aa5.13□□□□□ -1.59
SNU71YGR013W RPS1AP33442 255 aaKnown RBP5.13□□□□□ -1.59
SNU71YGR013W ETR1P38071 380 aa5.13□□□□□ -1.59
SNU71YGR013W TVP23P38962 199 aa5.13□□□□□ -1.59
SNU71YGR013W RMD6P39975 231 aa5.13□□□□□ -1.59
SNU71YGR013W DOC1P53068 250 aa5.13□□□□□ -1.59
SNU71YGR013W FLC3P53121 802 aa5.13□□□□□ -1.59
SNU71YGR013W NEJ1Q06148 342 aa5.13□□□□□ -1.59
SNU71YGR013W GTT2Q12390 233 aa5.13□□□□□ -1.59
SNU71YGR013W MDH3P32419 343 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
SNU71YGR013W YGR201CP42936 225 aa5.12□□□□□ -1.59
SNU71YGR013W DIE2P50076 525 aa5.12□□□□□ -1.59
SNU71YGR013W YLR030WQ07967 263 aa5.12□□□□□ -1.59
SNU71YGR013W YDL085C-AQ3E7B7 68 aaKnown RBP5.12□□□□□ -1.59
SNU71YGR013W YBL112CQ3E7Y4 105 aa5.12□□□□□ -1.59
SNU71YGR013W RPB9P27999 122 aa5.11□□□□□ -1.59
SNU71YGR013W SCM4P32564 187 aa5.11□□□□□ -1.59
SNU71YGR013W FMP23P38231 175 aa5.11□□□□□ -1.59
SNU71YGR013W LSM4P40070 187 aaKnown RBP5.11□□□□□ -1.59
SNU71YGR013W YER189WP40104 122 aa5.11□□□□□ -1.59
SNU71YGR013W SER2P42941 309 aa5.11□□□□□ -1.59
SNU71YGR013W PGU1P47180 361 aa5.11□□□□□ -1.59
SNU71YGR013W YGR026WP53217 278 aa5.11□□□□□ -1.59
SNU71YGR013W IES4Q08561 116 aa5.11□□□□□ -1.59
SNU71YGR013W UBC8P28263 218 aa5.11□□□□□ -1.59
SNU71YGR013W COS8P38723 381 aa5.11□□□□□ -1.59
SNU71YGR013W ASP1P38986 381 aaPredicted RBP5.11□□□□□ -1.59
SNU71YGR013W COQ5P49017 307 aa5.11□□□□□ -1.59
SNU71YGR013W YGR050CP53231 118 aa5.11□□□□□ -1.59
SNU71YGR013W YCL001W-AP87012 153 aa5.11□□□□□ -1.59
SNU71YGR013W PEX11Q12462 236 aa5.11□□□□□ -1.59
SNU71YGR013W YAL067W-AQ8TGK6 75 aa5.11□□□□□ -1.59
SNU71YGR013W YOR304C-AO14468 76 aa5.1□□□□□ -1.59
SNU71YGR013W MRPL15P36523 253 aa5.1□□□□□ -1.59
SNU71YGR013W YHL044WP38727 235 aa5.1□□□□□ -1.59
SNU71YGR013W RRT13P40042 185 aa5.1□□□□□ -1.59
SNU71YGR013W HST4P53688 370 aa5.1□□□□□ -1.59
SNU71YGR013W BOR1P53838 576 aa5.1□□□□□ -1.59
SNU71YGR013W MOT1P32333 1867 aa5.1□□□□□ -1.59
SNU71YGR013W CDC7P06243 507 aa5.09□□□□□ -1.59
SNU71YGR013W MRPL44P19956 98 aa5.09□□□□□ -1.59
SNU71YGR013W RFC2P40348 353 aa5.09□□□□□ -1.59
SNU71YGR013W GNA1P43577 159 aaPredicted RBP5.09□□□□□ -1.59
SNU71YGR013W YAE1P47118 141 aaPredicted RBP5.09□□□□□ -1.59
SNU71YGR013W ERV14P53173 138 aa5.09□□□□□ -1.59
SNU71YGR013W RRG7Q08774 242 aaPredicted RBP5.09□□□□□ -1.59
SNU71YGR013W SIR2P06700 562 aa5.09□□□□□ -1.6
SNU71YGR013W EPT1P22140 391 aa5.09□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms