RNA–Protein interactions for RNA: YER180C-A

SLO1, Transcript of Protein interacting with Arl3p, yeast

Gene SLO1, Length 258 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLO1	YER180C-A	IES3	Q12345	250 aa		4.19	□□□□□ -1.74
SLO1	YER180C-A	HTZ1	Q12692	134 aa	Known RBP	4.19	□□□□□ -1.74
SLO1	YER180C-A	TAL1	P15019	335 aa	Known RBP	4.18	□□□□□ -1.74
SLO1	YER180C-A	STF2	P16965	84 aa		4.18	□□□□□ -1.74
SLO1	YER180C-A	IPI1	P38803	334 aa	Predicted RBP	4.18	□□□□□ -1.74
SLO1	YER180C-A	UBP8	P50102	471 aa		4.18	□□□□□ -1.74
SLO1	YER180C-A	CWC23	P52868	283 aa	Predicted RBP	4.18	□□□□□ -1.74
SLO1	YER180C-A	TPN1	P53099	579 aa		4.18	□□□□□ -1.74
SLO1	YER180C-A	CAB4	P53332	305 aa		4.18	□□□□□ -1.74
SLO1	YER180C-A	THI74	Q04083	370 aa		4.18	□□□□□ -1.74
SLO1	YER180C-A	YHP1	Q04116	353 aa		4.18	□□□□□ -1.74
SLO1	YER180C-A	RXT3	Q07458	294 aa		4.18	□□□□□ -1.74
SLO1	YER180C-A	TDH1	P00360	332 aa	Known RBP	4.17	□□□□□ -1.74
SLO1	YER180C-A	SPT14	P32363	452 aa		4.17	□□□□□ -1.74
SLO1	YER180C-A	UTR5	P32630	166 aa		4.17	□□□□□ -1.74
SLO1	YER180C-A	PAN3	P36102	679 aa	Predicted RBP	4.17	□□□□□ -1.74
SLO1	YER180C-A	ATP3	P38077	311 aa	Known RBP	4.17	□□□□□ -1.74
SLO1	YER180C-A	POP8	P38208	133 aa		4.17	□□□□□ -1.74
SLO1	YER180C-A	COX15	P40086	486 aa		4.17	□□□□□ -1.74
SLO1	YER180C-A	RAI1	P53063	387 aa	Known RBP	4.17	□□□□□ -1.74
SLO1	YER180C-A	TOS8	P53147	276 aa		4.17	□□□□□ -1.74
SLO1	YER180C-A	LSM7	P53905	115 aa	Known RBP	4.17	□□□□□ -1.74
SLO1	YER180C-A	NRG1	Q03125	231 aa		4.17	□□□□□ -1.74
SLO1	YER180C-A	RTT103	Q05543	409 aa		4.17	□□□□□ -1.74
SLO1	YER180C-A	NOP1	P15646	327 aa	Known RBP	4.16	□□□□□ -1.74
SLO1	YER180C-A	MRPL38	P35996	138 aa	Predicted RBP	4.16	□□□□□ -1.74
SLO1	YER180C-A	COS8	P38723	381 aa		4.16	□□□□□ -1.74
SLO1	YER180C-A	YNL194C	P40169	301 aa		4.16	□□□□□ -1.74
SLO1	YER180C-A	YJR012C	P47087	207 aa		4.16	□□□□□ -1.74
SLO1	YER180C-A	MSE1	P48525	536 aa		4.16	□□□□□ -1.74
SLO1	YER180C-A	YGR219W	P53307	113 aa		4.16	□□□□□ -1.74
SLO1	YER180C-A	SSU72	P53538	206 aa	Predicted RBP	4.16	□□□□□ -1.74
SLO1	YER180C-A	PHO92	Q06390	306 aa		4.16	□□□□□ -1.74
SLO1	YER180C-A	PBP4	Q07362	185 aa	Known RBP	4.16	□□□□□ -1.74
SLO1	YER180C-A	PAM18	Q07914	168 aa		4.16	□□□□□ -1.74
SLO1	YER180C-A	ATG31	Q12421	196 aa		4.16	□□□□□ -1.74
SLO1	YER180C-A	RPN13	O13563	156 aa		4.15	□□□□□ -1.75
SLO1	YER180C-A	COX2	P00410	251 aa		4.15	□□□□□ -1.75
SLO1	YER180C-A	QCR2	P07257	368 aa		4.15	□□□□□ -1.75
SLO1	YER180C-A	TRP4	P07285	380 aa	Predicted RBP	4.15	□□□□□ -1.75
SLO1	YER180C-A	YCP4	P25349	247 aa	Known RBP	4.15	□□□□□ -1.75
SLO1	YER180C-A	LSM12	P38828	187 aa	Known RBP	4.15	□□□□□ -1.75
SLO1	YER180C-A	LST8	P41318	303 aa		4.15	□□□□□ -1.75
SLO1	YER180C-A	ARP3	P47117	449 aa	Known RBP	4.15	□□□□□ -1.75
SLO1	YER180C-A	IMD3	P50095	523 aa	Known RBP	4.15	□□□□□ -1.75
SLO1	YER180C-A	LRS4	Q04087	347 aa	Known RBP	4.15	□□□□□ -1.75
SLO1	YER180C-A	FSH2	Q05015	223 aa		4.15	□□□□□ -1.75
SLO1	YER180C-A	RAD28	Q12021	506 aa		4.15	□□□□□ -1.75
SLO1	YER180C-A	YJR112W-A	Q3E743	109 aa		4.15	□□□□□ -1.75
SLO1	YER180C-A	CAP2	P13517	287 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	GRX2	P17695	143 aa	Known RBP	4.14	□□□□□ -1.75
SLO1	YER180C-A	YCR016W	P25617	290 aa	Known RBP	4.14	□□□□□ -1.75
SLO1	YER180C-A	SDH4	P37298	181 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	YBR184W	P38299	523 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	MIC12	P38341	106 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	NIF3	P53081	288 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	GPG1	P53130	126 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	CRH1	P53301	507 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	YLR281C	Q05863	155 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	YLR224W	Q05947	369 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	RDI1	Q12434	202 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	YGL258W-A	Q3E740	77 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	YBR255C-A	Q3E776	120 aa		4.14	□□□□□ -1.75
SLO1	YER180C-A	SOD1	P00445	154 aa	Known RBP	4.13	□□□□□ -1.75
SLO1	YER180C-A	NHP6B	P11633	99 aa	Known RBP	4.13	□□□□□ -1.75
SLO1	YER180C-A	MRS4	P23500	304 aa		4.13	□□□□□ -1.75
SLO1	YER180C-A	YPS1	P32329	569 aa		4.13	□□□□□ -1.75
SLO1	YER180C-A	YKL069W	P36088	180 aa		4.13	□□□□□ -1.75
SLO1	YER180C-A	ERV15	P38312	142 aa		4.13	□□□□□ -1.75
SLO1	YER180C-A	YPT31	P38555	223 aa	Known RBP	4.13	□□□□□ -1.75
SLO1	YER180C-A	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.13	□□□□□ -1.75	not detected
SLO1	YER180C-A	SYG1	P40528	902 aa		4.13	□□□□□ -1.75
SLO1	YER180C-A	ECM27	P47144	725 aa		4.13	□□□□□ -1.75
SLO1	YER180C-A	ATG5	Q12380	294 aa		4.13	□□□□□ -1.75
SLO1	YER180C-A	TRM13	Q12383	476 aa		4.13	□□□□□ -1.75
SLO1	YER180C-A	MDM10	P18409	493 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	ERV1	P27882	189 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	MRP17	P28778	131 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	MRPL3	P36516	390 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	DOG2	P38773	246 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	DOG1	P38774	246 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	RTC3	P38804	111 aa	Predicted RBP	4.12	□□□□□ -1.75
SLO1	YER180C-A	MPC2	P38857	129 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	DFG10	P40526	253 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	MRPL49	P40858	161 aa	Predicted RBP	4.12	□□□□□ -1.75
SLO1	YER180C-A	PHO23	P50947	330 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	DUO1	P53168	247 aa	Known RBP	4.12	□□□□□ -1.75
SLO1	YER180C-A	CPD1	P53314	239 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	EST3	Q03096	181 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	YLR125W	Q12138	136 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	YCT1	Q12235	531 aa		4.12	□□□□□ -1.75
SLO1	YER180C-A	PET494	P07390	489 aa	Predicted RBP	4.11	□□□□□ -1.75
SLO1	YER180C-A	SPS2	P08459	502 aa		4.11	□□□□□ -1.75
SLO1	YER180C-A	SUA5	P32579	426 aa		4.11	□□□□□ -1.75
SLO1	YER180C-A	PDC2	P32896	925 aa		4.11	□□□□□ -1.75
SLO1	YER180C-A	FLO5	P38894	1075 aa		4.11	□□□□□ -1.75
SLO1	YER180C-A	ARO8	P53090	500 aa	Known RBP	4.11	□□□□□ -1.75
SLO1	YER180C-A	YGR050C	P53231	118 aa		4.11	□□□□□ -1.75
SLO1	YER180C-A	VPS28	Q02767	242 aa		4.11	□□□□□ -1.75
SLO1	YER180C-A	GRH1	Q04410	372 aa	Known RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms