RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W CDC43P18898 376 aa1.67□□□□□ -2.14
SIR4YDR227W RPL16AP26784 199 aaKnown RBP1.67□□□□□ -2.14
SIR4YDR227W HRR25P29295 494 aaKnown RBP1.67□□□□□ -2.14
SIR4YDR227W PET8P38921 284 aa1.67□□□□□ -2.14
SIR4YDR227W UIP3P39547 235 aa1.67□□□□□ -2.14
SIR4YDR227W PAN6P40459 309 aa1.67□□□□□ -2.14
SIR4YDR227W STB1P42845 420 aa1.67□□□□□ -2.14
SIR4YDR227W YFR057WP43625 151 aa1.67□□□□□ -2.14
SIR4YDR227W YER039C-AP0CD97 72 aa1.67□□□□□ -2.14
SIR4YDR227W EXO70P19658 623 aa1.67□□□□□ -2.14
SIR4YDR227W URA10P30402 227 aa1.67□□□□□ -2.14
SIR4YDR227W ERG24P32462 438 aaKnown RBP1.67□□□□□ -2.14
SIR4YDR227W TRR2P38816 342 aa1.67□□□□□ -2.14
SIR4YDR227W MAM33P40513 266 aa1.67□□□□□ -2.14
SIR4YDR227W APQ12P40532 138 aa1.67□□□□□ -2.14
SIR4YDR227W GPI2P46961 280 aa1.67□□□□□ -2.14
SIR4YDR227W YMR027WQ04371 470 aa1.67□□□□□ -2.14
SIR4YDR227W ERP1Q05359 219 aaKnown RBP1.67□□□□□ -2.14
SIR4YDR227W SNT309Q06091 175 aaPredicted RBP1.67□□□□□ -2.14
SIR4YDR227W SAC1P32368 623 aaKnown RBP1.66□□□□□ -2.14
SIR4YDR227W TES1P41903 349 aaKnown RBP1.66□□□□□ -2.14
SIR4YDR227W ORT1Q12375 292 aa1.66□□□□□ -2.14
SIR4YDR227W RPL21BQ12672 160 aaKnown RBP1.66□□□□□ -2.14
SIR4YDR227W YJL197C-AP0C5P0 93 aa1.66□□□□□ -2.14
SIR4YDR227W ACB1P31787 87 aa1.66□□□□□ -2.14
SIR4YDR227W NAT2P37293 288 aa1.66□□□□□ -2.14
SIR4YDR227W ARN1P38731 627 aa1.66□□□□□ -2.14
SIR4YDR227W YHL037CP38733 133 aa1.66□□□□□ -2.14
SIR4YDR227W PHM8P40025 321 aa1.66□□□□□ -2.14
SIR4YDR227W ECO1P43605 281 aa1.66□□□□□ -2.14
SIR4YDR227W PGU1P47180 361 aa1.66□□□□□ -2.14
SIR4YDR227W YNL140CP53910 189 aa1.66□□□□□ -2.14
SIR4YDR227W CTL1Q03220 320 aaKnown RBP1.66□□□□□ -2.14
SIR4YDR227W YLR281CQ05863 155 aa1.66□□□□□ -2.14
SIR4YDR227W ECI1Q05871 280 aa1.66□□□□□ -2.14
SIR4YDR227W YOR376WQ08900 122 aa1.66□□□□□ -2.14
SIR4YDR227W YOR214CQ12282 236 aa1.66□□□□□ -2.14
SIR4YDR227W RPL22AP05749 121 aaKnown RBP1.66□□□□□ -2.14
SIR4YDR227W RPL42AP0CX27 106 aaKnown RBP1.66□□□□□ -2.14
SIR4YDR227W RPL42BP0CX28 106 aaKnown RBP1.66□□□□□ -2.14
SIR4YDR227W HYM1P32464 399 aa1.66□□□□□ -2.14
SIR4YDR227W GPX2P38143 162 aa1.66□□□□□ -2.14
SIR4YDR227W YAR068WP39564 161 aa1.66□□□□□ -2.14
SIR4YDR227W YEL075CP39972 122 aa1.66□□□□□ -2.14
SIR4YDR227W YER189WP40104 122 aa1.66□□□□□ -2.14
SIR4YDR227W PRE5P40302 234 aaKnown RBP1.66□□□□□ -2.14
SIR4YDR227W ATP23P53722 227 aa1.66□□□□□ -2.14
SIR4YDR227W PIN3Q06449 215 aa1.66□□□□□ -2.14
SIR4YDR227W MCT1Q12283 360 aa1.66□□□□□ -2.14
SIR4YDR227W ERV2Q12284 196 aa1.66□□□□□ -2.14
SIR4YDR227W PCL9Q12477 304 aa1.66□□□□□ -2.14
SIR4YDR227W GCN1P33892 2672 aaKnown RBP1.66□□□□□ -2.14
SIR4YDR227W SMP1P38128 452 aa1.66□□□□□ -2.14
SIR4YDR227W SFT2P38166 215 aa1.66□□□□□ -2.14
SIR4YDR227W COX14P39103 70 aa1.66□□□□□ -2.14
SIR4YDR227W PAC10P48363 199 aa1.66□□□□□ -2.14
SIR4YDR227W TPN1P53099 579 aa1.66□□□□□ -2.14
SIR4YDR227W OCA6Q12454 224 aa1.66□□□□□ -2.14
SIR4YDR227W PHO85P17157 305 aa1.65□□□□□ -2.14
SIR4YDR227W IST2P38250 946 aa1.65□□□□□ -2.14
SIR4YDR227W PHO90P39535 881 aa1.65□□□□□ -2.14
SIR4YDR227W FMP48P53233 369 aa1.65□□□□□ -2.14
SIR4YDR227W PKR1Q03880 122 aaKnown RBP1.65□□□□□ -2.14
SIR4YDR227W DGA1Q08650 418 aa1.65□□□□□ -2.14
SIR4YDR227W KTI11Q3E840 82 aa1.65□□□□□ -2.14
SIR4YDR227W MSW1P04803 379 aa1.65□□□□□ -2.15
SIR4YDR227W SEC4P07560 215 aaKnown RBP1.65□□□□□ -2.15
SIR4YDR227W PMU1P36069 295 aa1.65□□□□□ -2.15
SIR4YDR227W ETR1P38071 380 aa1.65□□□□□ -2.15
SIR4YDR227W FES1P38260 290 aa1.65□□□□□ -2.15
SIR4YDR227W IPI1P38803 334 aaPredicted RBP1.65□□□□□ -2.15
SIR4YDR227W YMR134WP40207 237 aa1.65□□□□□ -2.15
SIR4YDR227W CDC40P40968 455 aaPredicted RBP1.65□□□□□ -2.15
SIR4YDR227W APJ1P53940 528 aa1.65□□□□□ -2.15
SIR4YDR227W YDR366CP87287 132 aa1.65□□□□□ -2.15
SIR4YDR227W THI74Q04083 370 aa1.65□□□□□ -2.15
SIR4YDR227W SPG4Q04438 115 aa1.65□□□□□ -2.15
SIR4YDR227W RIM9Q04734 239 aa1.65□□□□□ -2.15
SIR4YDR227W TIM18Q08749 192 aa1.65□□□□□ -2.15
SIR4YDR227W LAS17Q12446 633 aa1.65□□□□□ -2.15
SIR4YDR227W HUT1Q12520 339 aa1.65□□□□□ -2.15
SIR4YDR227W YML100W-AQ8TGT0 57 aa1.65□□□□□ -2.15
SIR4YDR227W PIS1P06197 220 aaKnown RBP1.65□□□□□ -2.15
SIR4YDR227W MIG1P27705 504 aa1.65□□□□□ -2.15
SIR4YDR227W SEC17P32602 292 aa1.65□□□□□ -2.15
SIR4YDR227W MEP2P41948 499 aa1.65□□□□□ -2.15
SIR4YDR227W MIC26P50087 233 aa1.65□□□□□ -2.15
SIR4YDR227W SAY1P53324 424 aa1.65□□□□□ -2.15
SIR4YDR227W HHF1P02309 103 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W RPL12AP0CX53 165 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W RPL12BP0CX54 165 aa1.64□□□□□ -2.15
SIR4YDR227W BGL2P15703 313 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W ECM34P38728 170 aa1.64□□□□□ -2.15
SIR4YDR227W OST1P41543 476 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W MOB2P43563 287 aa1.64□□□□□ -2.15
SIR4YDR227W FAR7P43592 221 aa1.64□□□□□ -2.15
SIR4YDR227W TDA4P47153 279 aa1.64□□□□□ -2.15
SIR4YDR227W LYS20P48570 428 aaKnown RBP1.64□□□□□ -2.15
SIR4YDR227W AIF1P52923 378 aa1.64□□□□□ -2.15
SIR4YDR227W VHT1P53241 593 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 145.5 ms