RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C MRPS8Q03799 155 aa2.26□□□□□ -2.05
RRP42YDL111C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
RRP42YDL111C FSF1Q12029 327 aaKnown RBP2.26□□□□□ -2.05
RRP42YDL111C NSL1Q12143 216 aa2.26□□□□□ -2.05
RRP42YDL111C RDI1Q12434 202 aa2.26□□□□□ -2.05
RRP42YDL111C FAB1P34756 2278 aa2.25□□□□□ -2.05
RRP42YDL111C PEX4P29340 183 aa2.25□□□□□ -2.05
RRP42YDL111C UTR5P32630 166 aa2.25□□□□□ -2.05
RRP42YDL111C KDX1P36005 433 aa2.25□□□□□ -2.05
RRP42YDL111C PAN3P36102 679 aaPredicted RBP2.25□□□□□ -2.05
RRP42YDL111C FIG1P38224 298 aa2.25□□□□□ -2.05
RRP42YDL111C NSG1P38837 291 aa2.25□□□□□ -2.05
RRP42YDL111C SVP26P38869 228 aa2.25□□□□□ -2.05
RRP42YDL111C AVT2P39981 480 aa2.25□□□□□ -2.05
RRP42YDL111C TIR3P40552 269 aa2.25□□□□□ -2.05
RRP42YDL111C YLR412C-AQ3E742 68 aa2.25□□□□□ -2.05
RRP42YDL111C YAR023CD6VPM8 179 aa2.24□□□□□ -2.05
RRP42YDL111C PHO88P38264 188 aaPredicted RBP2.24□□□□□ -2.05
RRP42YDL111C EDC3P39998 551 aaKnown RBP2.24□□□□□ -2.05
RRP42YDL111C MAK3Q03503 176 aa2.24□□□□□ -2.05
RRP42YDL111C MIX17Q03667 156 aa2.24□□□□□ -2.05
RRP42YDL111C YOR342CQ12182 319 aa2.24□□□□□ -2.05
RRP42YDL111C YML100W-AQ8TGT0 57 aa2.24□□□□□ -2.05
RRP42YDL111C TCB3Q03640 1545 aaKnown RBP2.23□□□□□ -2.05
RRP42YDL111C SCL1P21243 252 aaKnown RBP2.23□□□□□ -2.05
RRP42YDL111C SPO13P23624 291 aa2.23□□□□□ -2.05
RRP42YDL111C DER1P38307 211 aa2.23□□□□□ -2.05
RRP42YDL111C RFC2P40348 353 aa2.23□□□□□ -2.05
RRP42YDL111C XPT1P47165 209 aa2.23□□□□□ -2.05
RRP42YDL111C BOL2P53082 120 aa2.23□□□□□ -2.05
RRP42YDL111C TMA20P89886 181 aaPredicted RBP2.23□□□□□ -2.05
RRP42YDL111C CGI121Q03705 181 aaKnown RBP2.23□□□□□ -2.05
RRP42YDL111C YOL014WQ08110 124 aa2.23□□□□□ -2.05
RRP42YDL111C YFH7P43591 353 aa2.22□□□□□ -2.05
RRP42YDL111C GPI14P47088 403 aaKnown RBP2.22□□□□□ -2.05
RRP42YDL111C EAF6P47128 113 aa2.22□□□□□ -2.05
RRP42YDL111C ERG25P53045 309 aa2.22□□□□□ -2.05
RRP42YDL111C YGL235WP53071 178 aa2.22□□□□□ -2.05
RRP42YDL111C MPA43P53583 542 aaPredicted RBP2.22□□□□□ -2.05
RRP42YDL111C HSK3P69852 69 aa2.22□□□□□ -2.05
RRP42YDL111C NAT3Q06504 195 aa2.22□□□□□ -2.05
RRP42YDL111C YDL180WQ12301 547 aa2.22□□□□□ -2.05
RRP42YDL111C DGK1Q12382 290 aa2.22□□□□□ -2.05
RRP42YDL111C ATG40Q99325 256 aa2.22□□□□□ -2.05
RRP42YDL111C POR1P04840 283 aaKnown RBP2.21□□□□□ -2.06
RRP42YDL111C RPS28BP0C0X0 67 aaKnown RBP2.21□□□□□ -2.06
RRP42YDL111C FCY21P40039 528 aa2.21□□□□□ -2.06
RRP42YDL111C VTC1P40046 129 aaRIP-Chip data2.21□□□□□ -2.06not detected
RRP42YDL111C YNL217WP40152 326 aa2.21□□□□□ -2.06
RRP42YDL111C YFL019CP43576 117 aa2.21□□□□□ -2.06
RRP42YDL111C VPS71Q03433 280 aa2.21□□□□□ -2.06
RRP42YDL111C EFG1Q3E705 233 aaKnown RBP2.21□□□□□ -2.06
RRP42YDL111C RPS28AQ3E7X9 67 aaPredicted RBP2.21□□□□□ -2.06
RRP42YDL111C YBR209WP38311 105 aa2.2□□□□□ -2.06
RRP42YDL111C TTI2P47168 421 aa2.2□□□□□ -2.06
RRP42YDL111C YNR077CP53758 84 aa2.2□□□□□ -2.06
RRP42YDL111C YMR295CQ03559 197 aa2.2□□□□□ -2.06
RRP42YDL111C PDR18P53756 1333 aa2.19□□□□□ -2.06
RRP42YDL111C SPP41P38904 1435 aa2.19□□□□□ -2.06
RRP42YDL111C RAS2P01120 322 aaKnown RBP2.19□□□□□ -2.06
RRP42YDL111C DDI2P0CH63 225 aa2.19□□□□□ -2.06
RRP42YDL111C DDI3P0CH64 225 aa2.19□□□□□ -2.06
RRP42YDL111C YHR022CP38763 256 aa2.19□□□□□ -2.06
RRP42YDL111C SBH2P52871 88 aa2.19□□□□□ -2.06
RRP42YDL111C MPC3P53311 146 aa2.19□□□□□ -2.06
RRP42YDL111C YMR099CQ03161 297 aaKnown RBP2.19□□□□□ -2.06
RRP42YDL111C YDR476CQ03362 224 aa2.19□□□□□ -2.06
RRP42YDL111C PET20Q99373 253 aa2.19□□□□□ -2.06
RRP42YDL111C NUF2P33895 451 aa2.18□□□□□ -2.06
RRP42YDL111C YGL101WP53144 215 aa2.18□□□□□ -2.06
RRP42YDL111C SHH3Q04487 196 aa2.18□□□□□ -2.06
RRP42YDL111C YPR127WQ06494 345 aa2.18□□□□□ -2.06
RRP42YDL111C YLR236CA0A023PZG4 107 aa2.17□□□□□ -2.06
RRP42YDL111C TIR1P10863 254 aa2.17□□□□□ -2.06
RRP42YDL111C YCR023CP25351 611 aa2.17□□□□□ -2.06
RRP42YDL111C TFC1P32367 649 aa2.17□□□□□ -2.06
RRP42YDL111C SRP102P36057 244 aaPredicted RBP2.17□□□□□ -2.06
RRP42YDL111C AGE2P40529 298 aa2.17□□□□□ -2.06
RRP42YDL111C CUP9P41817 306 aa2.17□□□□□ -2.06
RRP42YDL111C ERJ5P43613 295 aaPredicted RBP2.17□□□□□ -2.06
RRP42YDL111C SOL1P50278 321 aa2.17□□□□□ -2.06
RRP42YDL111C RGM1Q00453 211 aa2.17□□□□□ -2.06
RRP42YDL111C CYT2Q00873 224 aa2.17□□□□□ -2.06
RRP42YDL111C DAS2Q12084 232 aa2.17□□□□□ -2.06
RRP42YDL111C ECM5Q03214 1411 aa2.17□□□□□ -2.06
RRP42YDL111C NSP1P14907 823 aaKnown RBP2.16□□□□□ -2.06
RRP42YDL111C BUB2P26448 306 aaPredicted RBP2.16□□□□□ -2.06
RRP42YDL111C FZF1P32805 299 aa2.16□□□□□ -2.06
RRP42YDL111C DSE2P38844 325 aa2.16□□□□□ -2.06
RRP42YDL111C SPC25P40014 221 aa2.16□□□□□ -2.06
RRP42YDL111C NSA2P40078 261 aaKnown RBP2.16□□□□□ -2.06
RRP42YDL111C YNL200CP40165 246 aaKnown RBP2.16□□□□□ -2.06
RRP42YDL111C YFR054CP43622 192 aa2.16□□□□□ -2.06
RRP42YDL111C LSM1P47017 172 aaKnown RBP2.16□□□□□ -2.06
RRP42YDL111C YJL027CP47063 138 aaPredicted RBP2.16□□□□□ -2.06
RRP42YDL111C MOG1P47123 218 aa2.16□□□□□ -2.06
RRP42YDL111C DAN1P47178 298 aa2.16□□□□□ -2.06
RRP42YDL111C NQM1P53228 333 aaPredicted RBP2.16□□□□□ -2.06
RRP42YDL111C TIM13P53299 105 aa2.16□□□□□ -2.06
RRP42YDL111C THI74Q04083 370 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms