RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W ERV1P27882 189 aa4.34□□□□□ -1.71
SIF2YBR103W MDH3P32419 343 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
SIF2YBR103W EMP70P32802 667 aa4.34□□□□□ -1.71
SIF2YBR103W RPS27AP35997 82 aaKnown RBP4.34□□□□□ -1.71
SIF2YBR103W MRPL24P36525 258 aaPredicted RBP4.34□□□□□ -1.71
SIF2YBR103W MRPS9P38120 278 aa4.34□□□□□ -1.71
SIF2YBR103W RPS27BP38711 82 aa4.34□□□□□ -1.71
SIF2YBR103W DOG2P38773 246 aa4.34□□□□□ -1.71
SIF2YBR103W YHR097CP38809 366 aaKnown RBP4.34□□□□□ -1.71
SIF2YBR103W PAC2P39937 518 aa4.34□□□□□ -1.71
SIF2YBR103W YEA6P39953 335 aa4.34□□□□□ -1.71
SIF2YBR103W CAT5P41735 233 aa4.34□□□□□ -1.71
SIF2YBR103W MEP2P41948 499 aa4.34□□□□□ -1.71
SIF2YBR103W YGR149WP48236 432 aa4.34□□□□□ -1.71
SIF2YBR103W RIB4P50861 169 aaPredicted RBP4.34□□□□□ -1.71
SIF2YBR103W YIP4P53093 235 aa4.34□□□□□ -1.71
SIF2YBR103W SMM1P53720 384 aaKnown RBP4.34□□□□□ -1.71
SIF2YBR103W MPP6P53725 186 aaPredicted RBP4.34□□□□□ -1.71
SIF2YBR103W MET31Q03081 177 aa4.34□□□□□ -1.71
SIF2YBR103W LOA1Q06508 300 aa4.34□□□□□ -1.71
SIF2YBR103W TMS1Q12116 473 aa4.34□□□□□ -1.71
SIF2YBR103W RPL7BQ12213 244 aaKnown RBP4.34□□□□□ -1.71
SIF2YBR103W LAS17Q12446 633 aa4.34□□□□□ -1.71
SIF2YBR103W YPR064WQ12492 139 aa4.34□□□□□ -1.71
SIF2YBR103W QCR7P00128 127 aa4.33□□□□□ -1.72
SIF2YBR103W TDH2P00358 332 aaKnown RBP4.33□□□□□ -1.72
SIF2YBR103W TDH3P00359 332 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
SIF2YBR103W MES1P00958 751 aaKnown RBP4.33□□□□□ -1.72
SIF2YBR103W BGL2P15703 313 aaKnown RBP4.33□□□□□ -1.72
SIF2YBR103W SAG1P20840 650 aa4.33□□□□□ -1.72
SIF2YBR103W OCH1P31755 480 aa4.33□□□□□ -1.72
SIF2YBR103W MRP49P32388 137 aa4.33□□□□□ -1.72
SIF2YBR103W GLC7P32598 312 aaKnown RBP4.33□□□□□ -1.72
SIF2YBR103W DOG1P38774 246 aa4.33□□□□□ -1.72
SIF2YBR103W SPC25P40014 221 aa4.33□□□□□ -1.72
SIF2YBR103W YER121WP40076 114 aa4.33□□□□□ -1.72
SIF2YBR103W MPM1P40364 252 aa4.33□□□□□ -1.72
SIF2YBR103W YGL262WP53054 175 aa4.33□□□□□ -1.72
SIF2YBR103W PNC1P53184 216 aaKnown RBP4.33□□□□□ -1.72
SIF2YBR103W GIS1Q03833 894 aa4.33□□□□□ -1.72
SIF2YBR103W UTP15Q04305 513 aaKnown RBP4.33□□□□□ -1.72
SIF2YBR103W MRX8Q05473 314 aa4.33□□□□□ -1.72
SIF2YBR103W CTR3Q06686 241 aa4.33□□□□□ -1.72
SIF2YBR103W TIR4Q12218 487 aaPredicted RBP4.33□□□□□ -1.72
SIF2YBR103W ERV2Q12284 196 aa4.33□□□□□ -1.72
SIF2YBR103W GEP5Q12393 293 aa4.33□□□□□ -1.72
SIF2YBR103W GLT1Q12680 2145 aaKnown RBP4.33□□□□□ -1.72
SIF2YBR103W MEC1P38111 2368 aa4.33□□□□□ -1.72
SIF2YBR103W PCL1P24867 279 aa4.32□□□□□ -1.72
SIF2YBR103W TIP1P27654 210 aaPredicted RBP4.32□□□□□ -1.72
SIF2YBR103W CNE1P27825 502 aa4.32□□□□□ -1.72
SIF2YBR103W PPA2P28239 310 aa4.32□□□□□ -1.72
SIF2YBR103W PUB1P32588 453 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
SIF2YBR103W NAS2P40555 220 aa4.32□□□□□ -1.72
SIF2YBR103W PAU5P43575 122 aa4.32□□□□□ -1.72
SIF2YBR103W SBH2P52871 88 aa4.32□□□□□ -1.72
SIF2YBR103W VPS73P53142 486 aaKnown RBP4.32□□□□□ -1.72
SIF2YBR103W HHT1P61830 136 aa4.32□□□□□ -1.72
SIF2YBR103W TMA23Q03525 211 aa4.32□□□□□ -1.72
SIF2YBR103W YDL242WQ07746 117 aa4.32□□□□□ -1.72
SIF2YBR103W RLM1Q12224 676 aa4.32□□□□□ -1.72
SIF2YBR103W COX19Q3E731 98 aa4.32□□□□□ -1.72
SIF2YBR103W YKL018C-AQ3E7A7 99 aa4.32□□□□□ -1.72
SIF2YBR103W NOP1P15646 327 aaKnown RBP4.32□□□□□ -1.72
SIF2YBR103W MXR2P25566 168 aa4.32□□□□□ -1.72
SIF2YBR103W ALK2P32789 676 aaPredicted RBP4.32□□□□□ -1.72
SIF2YBR103W PAN3P36102 679 aaPredicted RBP4.32□□□□□ -1.72
SIF2YBR103W YHR130CP38834 111 aa4.32□□□□□ -1.72
SIF2YBR103W SMD3P43321 101 aaKnown RBP4.32□□□□□ -1.72
SIF2YBR103W STE24P47154 453 aa4.32□□□□□ -1.72
SIF2YBR103W MSY1P48527 492 aa4.32□□□□□ -1.72
SIF2YBR103W PDR17P53844 350 aa4.32□□□□□ -1.72
SIF2YBR103W YMR166CQ03829 368 aa4.32□□□□□ -1.72
SIF2YBR103W YLR040CQ07988 224 aa4.32□□□□□ -1.72
SIF2YBR103W DCI1Q08558 271 aa4.32□□□□□ -1.72
SIF2YBR103W YLR050CQ12155 161 aaKnown RBP4.32□□□□□ -1.72
SIF2YBR103W FRE8Q12209 686 aa4.32□□□□□ -1.72
SIF2YBR103W YPT1P01123 206 aaKnown RBP4.31□□□□□ -1.72
SIF2YBR103W MEK1P24719 497 aaPredicted RBP4.31□□□□□ -1.72
SIF2YBR103W YCR007CP25354 239 aa4.31□□□□□ -1.72
SIF2YBR103W YKL187CP34231 750 aa4.31□□□□□ -1.72
SIF2YBR103W PHD1P36093 366 aa4.31□□□□□ -1.72
SIF2YBR103W SHE1P38200 338 aa4.31□□□□□ -1.72
SIF2YBR103W DER1P38307 211 aa4.31□□□□□ -1.72
SIF2YBR103W RPL13BP40212 199 aaKnown RBP4.31□□□□□ -1.72
SIF2YBR103W ATF1P40353 525 aa4.31□□□□□ -1.72
SIF2YBR103W KEI1Q06346 221 aa4.31□□□□□ -1.72
SIF2YBR103W YBR056W-AI2HB52 66 aa4.3□□□□□ -1.72
SIF2YBR103W MBF1O14467 151 aaKnown RBP4.3□□□□□ -1.72
SIF2YBR103W YER190C-BP0CX94 160 aa4.3□□□□□ -1.72
SIF2YBR103W YEL077W-AP0CX95 160 aa4.3□□□□□ -1.72
SIF2YBR103W YGR296C-BP0CX96 160 aa4.3□□□□□ -1.72
SIF2YBR103W YPL283W-BP0CX97 160 aa4.3□□□□□ -1.72
SIF2YBR103W YPR204C-AP0CX98 160 aa4.3□□□□□ -1.72
SIF2YBR103W IDH2P28241 369 aaKnown RBP4.3□□□□□ -1.72
SIF2YBR103W TRR2P38816 342 aa4.3□□□□□ -1.72
SIF2YBR103W HSP10P38910 106 aa4.3□□□□□ -1.72
SIF2YBR103W YJR015WP47090 510 aa4.3□□□□□ -1.72
SIF2YBR103W TTI2P47168 421 aa4.3□□□□□ -1.72
SIF2YBR103W BNS1P50084 137 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms