RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 TNFSF13BQ9Y275 285 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 BAHCC1Q9P281 2608 aa18.48■□□□□ 0.55
PHGDH-234ENST00000642041 CHD8Q9HCK8 2581 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 KAT6AQ92794 2004 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 USP27XA6NNY8 438 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 BTNL10A8MVZ5 291 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 PJA2O43164 708 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 IL18RAPO95256 599 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 SOX5P35711 763 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 MAGEA1P43355 309 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 KLK7P49862 253 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 JAM2P57087 298 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 RBM10P98175 930 aaKnown RBP18.47■□□□□ 0.55
PHGDH-234ENST00000642041 GCNT1Q02742 428 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 MCL1Q07820 350 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 PRPF4BQ13523 1007 aaKnown RBP18.47■□□□□ 0.55
PHGDH-234ENST00000642041 CCDC122Q5T0U0 273 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 MPZL3Q6UWV2 235 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 RHPN2Q8IUC4 686 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 CMTR2Q8IYT2 770 aaKnown RBP18.47■□□□□ 0.55
PHGDH-234ENST00000642041 C17orf53Q8N3J3 647 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-234ENST00000642041 VN1R2Q8NFZ6 395 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 TRIM58Q8NG06 486 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 LMBR1Q8WVP7 490 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 ALS2CR12Q96Q35 445 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 CDCA3Q99618 268 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-234ENST00000642041 IMPG2Q9BZV3 1241 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 SEMA4AQ9H3S1 761 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 RAB20Q9NX57 234 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 ARHGAP20Q9P2F6 1191 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 DNAJC12Q9UKB3 198 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 NR2E1Q9Y466 385 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 CHD6Q8TD26 2715 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 SPTBN2O15020 2390 aa18.47■□□□□ 0.55
PHGDH-234ENST00000642041 SMIM35A0A1B0GVV1 85 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 ANO9A1A5B4 782 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 CTAGE9A4FU28 777 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 PER2O15055 1255 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 TBXAS1P24557 533 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-234ENST00000642041 AXLP30530 894 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 EIF4A3P38919 411 aaKnown RBP18.46■□□□□ 0.55
PHGDH-234ENST00000642041 TMEM184AQ6ZMB5 413 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 TAS1R3Q7RTX0 852 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 KIAA2013Q8IYS2 634 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 LINC01465Q8N7H1 131 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 TRAPPC12Q8WVT3 735 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 ZNF592Q92610 1267 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 ACO2Q99798 780 aaKnown RBP18.46■□□□□ 0.55
PHGDH-234ENST00000642041 ADPGKQ9BRR6 497 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 FAM213AQ9BRX8 229 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 TMEM117Q9H0C3 514 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 MFSD1Q9H3U5 465 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 DLL3Q9NYJ7 618 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 PCDHA13Q9Y5I0 950 aa18.46■□□□□ 0.55
PHGDH-234ENST00000642041 TACC1O75410 805 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 LMNAP02545 664 aaKnown RBP18.45■□□□□ 0.54
PHGDH-234ENST00000642041 CHRNA1P02708 482 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 SRGAP2CP0DJJ0 459 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 MCF2P10911 925 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 DUSP6Q16828 381 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 TMEM132AQ24JP5 1023 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 ASTE1Q2TB18 679 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-234ENST00000642041 HGSNATQ68CP4 663 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 DPY19L2P1Q6NXN4 242 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 SYT10Q6XYQ8 523 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 IRF2BP2Q7Z5L9 587 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 CBWD2Q8IUF1 395 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 WDR49Q8IV35 697 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 MICAL1Q8TDZ2 1067 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 KIFC3Q9BVG8 833 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 GCOM2Q9BZD3 368 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-234ENST00000642041 L2HGDHQ9H9P8 463 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 SIX2Q9NPC8 291 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 SETD4Q9NVD3 440 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 RBAKQ9NYW8 714 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-234ENST00000642041 DNAI1Q9UI46 699 aa18.45■□□□□ 0.54
PHGDH-234ENST00000642041 KIAA1671Q9BY89 1806 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 OTOGLQ3ZCN5 2332 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 MBLAC1A4D2B0 266 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-234ENST00000642041 INO80B-WBP1J3KQ70 363 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 DYNC1I1O14576 645 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 SRGAP2BP0DMP2 458 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 GHRP10912 638 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 TNNI1P19237 187 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 SP100P23497 879 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-234ENST00000642041 UBE3AQ05086 875 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 CBWD6Q4V339 395 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 CBWD3Q5JTY5 395 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 CBWD5Q5RIA9 395 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 ATF7IP2Q5U623 682 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 ANKRD54Q6NXT1 300 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 TAF2Q6P1X5 1199 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 SLC39A4Q6P5W5 647 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 ZNF677Q86XU0 584 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 BRSK2Q8IWQ3 736 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 LRRC71Q8N4P6 559 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 TTC39CQ8N584 583 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 LMO3Q8TAP4 145 aa18.44■□□□□ 0.54
PHGDH-234ENST00000642041 SECISBP2LQ93073 1101 aaKnown RBP18.44■□□□□ 0.54
PHGDH-234ENST00000642041 CGRRF1Q99675 332 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms